Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P08
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 250 1e-66
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 248 3e-66
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 213 1e-55
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 4e-45
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 125 3e-29
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 99 4e-21
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013) 29 3.3
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.3
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 5.7
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 28 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 250 bits (611), Expect = 1e-66
Identities = 117/148 (79%), Positives = 131/148 (88%)
Frame = +3
Query: 207 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 386
YVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+ V DM HWPF V+ +G +
Sbjct: 41 YVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGER 100
Query: 387 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 566
P I+V +KGE K+FFPEE+SSMVLTKM ETAEAYLG V +AV+TVPAYF+DSQRQATKD
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKD 160
Query: 567 AGTISGLNVLRIINEPTAAAIAYGLDKK 650
AGTI+GLNVLRIINEPTAAAIAYGLDKK
Sbjct: 161 AGTIAGLNVLRIINEPTAAAIAYGLDKK 188
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +2
Query: 86 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 193
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQG +
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNR 36
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 248 bits (607), Expect = 3e-66
Identities = 116/147 (78%), Positives = 132/147 (89%)
Frame = +3
Query: 207 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 386
YV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++ ATVQ+DMK WPF+++SD K
Sbjct: 41 YVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNK 100
Query: 387 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 566
P I+V YKGE KTF EE+SSMVL KM ETAEAYLG+ V +AVITVPAYFNDSQRQATKD
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKD 160
Query: 567 AGTISGLNVLRIINEPTAAAIAYGLDK 647
AGTI+GLNVLR+INEPTAAA+AYGLDK
Sbjct: 161 AGTIAGLNVLRVINEPTAAALAYGLDK 187
Score = 70.9 bits (166), Expect = 8e-13
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2
Query: 86 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 193
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQG +
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNR 36
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 213 bits (519), Expect = 1e-55
Identities = 103/149 (69%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
Frame = +3
Query: 207 YVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGG 383
YVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++ +VQ D+K +PF+VV
Sbjct: 738 YVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNK 797
Query: 384 KPXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATK 563
KP ++V K E KTF EE+S+MVLTKM ETAEAYLGK V +AV+TVPAYFND+QRQATK
Sbjct: 798 KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Query: 564 DAGTISGLNVLRIINEPTAAAIAYGLDKK 650
DAG I+GL V+RIINEPTAAAIAYG+DKK
Sbjct: 858 DAGAIAGLTVMRIINEPTAAAIAYGMDKK 886
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = +2
Query: 104 VGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 193
+GIDLGTTYSCVGVF++G+VEIIANDQG +
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNR 733
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 178 bits (433), Expect = 4e-45
Identities = 95/147 (64%), Positives = 105/147 (71%), Gaps = 25/147 (17%)
Frame = +3
Query: 207 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDGGK 386
YVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+ V+ DMKHW FEVV++ G+
Sbjct: 41 YVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGR 100
Query: 387 PXIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMXETAEAYL 491
P +KV YKGE KTFF EEV SSMVL KM ETAEAYL
Sbjct: 101 PKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160
Query: 492 GKTVQNAVITVPAYFNDSQRQATKDAG 572
G V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 161 GCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 125 bits (301), Expect = 4e-29
Identities = 61/71 (85%), Positives = 65/71 (91%)
Frame = +3
Query: 438 EVSSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 617
++SSMVL KM ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 618 AAAIAYGLDKK 650
AAAIAYGLDKK
Sbjct: 271 AAAIAYGLDKK 281
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +2
Query: 86 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 193
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQG +
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNR 36
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 125 bits (302), Expect = 3e-29
Identities = 68/148 (45%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Frame = +3
Query: 210 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVSDG-GK 386
VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D G
Sbjct: 71 VAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN 130
Query: 387 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 566
V KG PEE+ V+ K+ AE L TV AV++VPA F+ QR AT
Sbjct: 131 AGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVK 190
Query: 567 AGTISGLNVLRIINEPTAAAIAYGLDKK 650
A +++G+ VLR+INEPTAAA+AYGL KK
Sbjct: 191 AASLAGITVLRVINEPTAAALAYGLHKK 218
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +2
Query: 92 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIAND 181
K +GIDLGTTYSCVG +Q G+++I +++
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDE 61
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 108 bits (259), Expect = 4e-24
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Frame = +3
Query: 270 NPNNTIFDAKRLIGRKFEXATVQADMKHWPFEVVS-DGGKPXIKVAYKGEDKTFFPEEVS 446
N NTI KR IGRKF VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 447 SMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 626
+M+ T++ TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 627 IAYGLDKK 650
+AYG+ K+
Sbjct: 238 LAYGIYKQ 245
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 98.7 bits (235), Expect = 4e-21
Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 24/109 (22%)
Frame = +3
Query: 393 IKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 572
I V GE ++F PE++S++VL ++ AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 573 TISGLN------------------------VLRIINEPTAAAIAYGLDK 647
TI+GL+ VLRIINEPTAAAIAYGLDK
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDK 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +3
Query: 387 PXIKVAYKGEDKTFFPEEVSSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 566
P +K Y+ D TF PEE+ M+L E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 567 AGTISGLNVLRIINEPTAAAIAYGL 641
A + GLNVL+I+N TA A+ YGL
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGL 151
>SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013)
Length = 119
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +3
Query: 297 KRLIGRKFEXATVQADMKHWPFEVVSDGGKPXIKVAYKGEDKTFFPEEVSSMVLTKMXET 476
K ++G + E A + + WPF+V + K + K P + +++ +TKM E
Sbjct: 42 KLVLGER-ERAIQELSQQQWPFDVQDPALESTSKDLKETPIKETSPVQAATLNMTKMEEN 100
Query: 477 AEAYLGKT 500
+ G T
Sbjct: 101 QQELSGNT 108
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 291 RILCCWGSSPPGSWRH 244
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 291 RILCCWGSSPPGSWRH 244
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 218 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRXCYCASRHEALA 358
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 218 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRXCYCASR 343
H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 282 HGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,423,757
Number of Sequences: 59808
Number of extensions: 398998
Number of successful extensions: 906
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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