Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_P07
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C798 Cluster: SJCHGC08029 protein; n=1; Schistosoma j...    33   7.8  
UniRef50_A1CQ65 Cluster: Vesicle transport v-SNARE protein super...    33   7.8  
UniRef50_A3HAL2 Cluster: Putative uncharacterized protein precur...    33   7.8  

>UniRef50_Q5C798 Cluster: SJCHGC08029 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08029 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 201

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 27/111 (24%), Positives = 51/111 (45%)
 Frame = +2

Query: 224 CLNVINYACYVIEKSCSXGEFDECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDP 403
           CLN +  + Y  +K CS  +F + E ++  +   +  ++ C    ++CS +   Q     
Sbjct: 53  CLNCLLISFYPFQKECSTYDFCDYESQITVIPVAVFVIILC----LICSNQISVQI---- 104

Query: 404 RIQLHVLTHPNMTVFRKCDLDNSIPQPFWIETLSKFSRLVVLDLKFICTDE 556
            I L +L      +F  C+ +N I     I  L +F+ L+V+  +F+   E
Sbjct: 105 YIGLEIL-----YLFFNCNTENIILVLGLINLLFRFANLLVIYNQFLLIKE 150


>UniRef50_A1CQ65 Cluster: Vesicle transport v-SNARE protein
           superfamily; n=16; Pezizomycotina|Rep: Vesicle transport
           v-SNARE protein superfamily - Aspergillus clavatus
          Length = 227

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 433 QHDSLPQMRSR*LNTPTILDRNSLEIQSSCRSRPQIHMHRRNTQRSGPELSPSRXTKHSL 612
           + DSL    SR L++   L  ++L+  +  R R  +H HRR  QR    ++ SR   + L
Sbjct: 60  RRDSLISQLSRLLDSEATLTASALKQNNLTRHREVLHDHRRELQRLNSAIAESRDRANLL 119

Query: 613 ES 618
            +
Sbjct: 120 SN 121


>UniRef50_A3HAL2 Cluster: Putative uncharacterized protein
           precursor; n=1; Caldivirga maquilingensis IC-167|Rep:
           Putative uncharacterized protein precursor - Caldivirga
           maquilingensis IC-167
          Length = 796

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 121 LLYIIFVTFYILLVNNSIFVLSKTYC 44
           L+Y+I+ T YIL +NN+   L ++YC
Sbjct: 192 LVYVIYATGYILYLNNTTLQLPRSYC 217


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,979,963
Number of Sequences: 1657284
Number of extensions: 11019275
Number of successful extensions: 28036
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28030
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)