Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P04
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 219 6e-56
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 206 5e-52
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 190 3e-47
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 180 4e-44
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 174 2e-42
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 171 1e-41
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 170 3e-41
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 166 4e-40
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 165 6e-40
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 161 2e-38
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 161 2e-38
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 158 1e-37
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 158 1e-37
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 156 4e-37
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 146 4e-34
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 142 5e-33
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 142 5e-33
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 141 2e-32
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 137 2e-31
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 136 6e-31
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 134 1e-30
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 132 5e-30
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 129 5e-29
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 125 1e-27
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 124 2e-27
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 124 2e-27
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 124 2e-27
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 124 2e-27
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 119 5e-26
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 116 5e-25
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 112 8e-24
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 105 1e-21
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 101 1e-20
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 101 1e-20
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 95 1e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 94 2e-18
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 87 3e-16
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 84 2e-15
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 81 2e-14
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 77 3e-13
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 75 1e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 75 1e-12
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 73 6e-12
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 73 6e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 70 6e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 1e-10
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 68 2e-10
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 67 4e-10
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 66 7e-10
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 66 9e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 65 1e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 64 2e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 63 6e-09
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 63 6e-09
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 62 1e-08
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 62 1e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 62 1e-08
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 61 2e-08
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 58 1e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 58 2e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 58 2e-07
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 58 2e-07
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 58 2e-07
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 56 6e-07
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 55 1e-06
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 54 3e-06
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 54 3e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 54 3e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 2e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 50 4e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 49 8e-05
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 48 1e-04
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 1e-04
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 48 3e-04
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 48 3e-04
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 47 3e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 47 5e-04
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 45 0.001
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 45 0.001
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 45 0.002
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.002
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 44 0.003
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 43 0.007
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 42 0.010
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 41 0.022
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 41 0.022
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 41 0.030
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.039
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 40 0.068
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 39 0.090
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 39 0.12
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 38 0.16
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 38 0.28
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 37 0.36
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 36 0.84
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 35 1.5
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 34 2.6
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 33 5.9
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 33 5.9
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 33 7.8
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 219 bits (534), Expect = 6e-56
Identities = 121/216 (56%), Positives = 128/216 (59%)
Frame = +3
Query: 3 RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAX 182
RK +YSTNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 1 RKWLYSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAF 60
Query: 183 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAG 362
N LVPL+LGAPD+AFPR+NN+ F IV NGAG
Sbjct: 61 IMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAG 120
Query: 363 TG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 542
TG TVYPPLSSNIAH G SV LAIFSLHLAGISS SFDQ+PL
Sbjct: 121 TGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPL 180
Query: 543 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
FV AVGITAF AGAIT+LLTDRNLNTSF
Sbjct: 181 FVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSF 216
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 206 bits (502), Expect = 5e-52
Identities = 112/202 (55%), Positives = 131/202 (64%)
Frame = -3
Query: 646 DVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXX 467
+VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 17 EVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPK 76
Query: 466 IDEIPAKCSEKIARXTDLPLCAILDESGG*TVHPVPAPFXTIXLEINNIREGGRSQNLIL 287
I+E PAKC+EKI TD P CAI SGG TVHPVP P TI L + ++EGG +QNL+L
Sbjct: 77 IEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLML 136
Query: 286 FIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSA 107
FIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S PI PG PNSA
Sbjct: 137 FIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSA 195
Query: 106 RIKSLKDVPIIPDQIPKIKYNV 41
RIKSL DVP +P PK+KYNV
Sbjct: 196 RIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 190 bits (462), Expect = 3e-47
Identities = 103/180 (57%), Positives = 111/180 (61%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 291 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXX 470
+ F IV NGAGTG TVYPPLSSNIAH G SV LAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 180 bits (437), Expect = 4e-44
Identities = 102/213 (47%), Positives = 116/213 (54%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
++STNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 8 LFSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMI 67
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N LVPL++GAPD+AFPR+NN+ F V GAGTG
Sbjct: 68 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGW 127
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
TVYPPL+ N+AH G SV LAIFSLHLAGISS S Q PLFV
Sbjct: 128 TVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVW 187
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+V ITA A IT+LLTDRNLNT+F
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 220
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 174 bits (423), Expect = 2e-42
Identities = 98/212 (46%), Positives = 112/212 (52%)
Frame = +3
Query: 15 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 194
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
N LVPL++GAPD+AFPR+NN+ F V GAGTG T
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
VYPPL+ N+AH G SV L IFSLHLAG+SS S Q PLFV A
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWA 187
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +TA A IT+LLTDRNLNT+F
Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 171 bits (416), Expect = 1e-41
Identities = 96/212 (45%), Positives = 112/212 (52%)
Frame = +3
Query: 15 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 194
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
N LVPL++GAPD+AFPR+NN+ F V GAGTG T
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
VYPPL+ N+AH G SV L IFSLHLAG+SS + Q PLFV +
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWS 187
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +TA A IT+LLTDRNLNT+F
Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 170 bits (413), Expect = 3e-41
Identities = 95/213 (44%), Positives = 113/213 (53%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
++STNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 7 LFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMI 66
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N LVPL++GAPD+AFPR+NN+ F +V GAGTG
Sbjct: 67 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGW 126
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
TVYPPL+ N +H G SV L IFSLHLAG+SS + Q PLFV
Sbjct: 127 TVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVW 186
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+V ITA A IT+LLTDRNLNT+F
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 219
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 166 bits (404), Expect = 4e-40
Identities = 95/208 (45%), Positives = 108/208 (51%)
Frame = +3
Query: 27 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 206
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 207 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPP 386
N L+PL++GAPD+AFPR+NN+ F + GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 387 LSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 566
L+ N+AH G SV L IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 567 AFXXXXXXXXXAGAITILLTDRNLNTSF 650
A A IT+LLTDRNLNT+F
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTF 208
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 165 bits (402), Expect = 6e-40
Identities = 91/212 (42%), Positives = 111/212 (52%)
Frame = +3
Query: 15 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 194
+S NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
N VPL++GAPD+AFPR+NNI F +V GAGTG T
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWT 128
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
VYPPL+S AH G SV +AIFSLHLAG+SS + ++PLFV +
Sbjct: 129 VYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWS 188
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V ITA AGAIT+LLTDR NT+F
Sbjct: 189 VLITAILLLLSLPVLAGAITMLLTDRYFNTTF 220
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 161 bits (390), Expect = 2e-38
Identities = 94/215 (43%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVP+++GAPD+AFPR+NNI F V GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLS +H G SV LAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 161 bits (390), Expect = 2e-38
Identities = 94/215 (43%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVP+++GAPD+AFPR+NNI F V GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLS +H G SV LAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V A+ +TA AGAIT+LLTDRN NTSF
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSF 219
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 158 bits (383), Expect = 1e-37
Identities = 87/180 (48%), Positives = 100/180 (55%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 291 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXX 470
+ F V +GAGTG TVYPPLS N AH G SV LAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 158 bits (383), Expect = 1e-37
Identities = 88/215 (40%), Positives = 111/215 (51%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 185
++STNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 8 LFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFL 67
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N VP+++GAPD+AFPR+NNI F +V G+GT
Sbjct: 68 MIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGT 127
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLS +H G +V LAIFSLHL+G+SS + +LPLF
Sbjct: 128 GWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLF 187
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +V +TAF AGAIT+LLTDRN NT+F
Sbjct: 188 VWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTF 222
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 156 bits (379), Expect = 4e-37
Identities = 89/215 (41%), Positives = 112/215 (52%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
I+STNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 13 IFSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFL 72
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVP+++G+PD+AFPR+NNI F +V G GT
Sbjct: 73 MIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGT 132
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLSS +H G +V LAIFSLH++G SS S ++PLF
Sbjct: 133 GWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLF 192
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V ++ +TAF AGAIT+LLTDRN NTSF
Sbjct: 193 VWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSF 227
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 146 bits (354), Expect = 4e-34
Identities = 81/180 (45%), Positives = 99/180 (55%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 291 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXX 470
+ F + G GTG TVYPPLS + H G SV L IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 142 bits (345), Expect = 5e-33
Identities = 86/215 (40%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N L+PL++GA D AFPRINNI F +V +GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLSS AH G SV LAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V ++ ITAF + IT+LL DRN NTSF
Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSF 220
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 142 bits (345), Expect = 5e-33
Identities = 86/215 (40%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N L+PL++GA D AFPRINNI F +V +GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLSS AH G SV LAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V ++ ITAF + IT+LL DRN NTSF
Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSF 220
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 141 bits (341), Expect = 2e-32
Identities = 84/215 (39%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N ++PL++GA D++FPRIN+I F +V +GAGT
Sbjct: 66 MIFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLSS AH G SV LAIFSLHL ISS S ++PLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLF 185
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V A+ ITAF + IT+LL DRN NTSF
Sbjct: 186 VWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSF 220
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 137 bits (332), Expect = 2e-31
Identities = 83/212 (39%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 194
S+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
N L+PL LG PD+ FPR+NNI + + NG GTG T
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWT 128
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
+YPPLS +H G SV LAIF LHL+GISS +L LF A
Sbjct: 129 LYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWA 188
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V ITA AG IT++LTDRN NTSF
Sbjct: 189 VVITAVLLLLSLPVLAGGITMVLTDRNFNTSF 220
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 136 bits (328), Expect = 6e-31
Identities = 81/215 (37%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDI LY EL PG L G++Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAIL 65
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N ++PL++GA D AFPRINNI F +V +GAGT
Sbjct: 66 MIFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPL+S AH G SV LAIF+LH+ ISS + +LPLF
Sbjct: 126 GWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V A+ ITA + +T+LL DRN NTSF
Sbjct: 186 VWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSF 220
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 134 bits (325), Expect = 1e-30
Identities = 81/200 (40%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVP+++GAPD+AFPR+NNI F V GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLS +H G SV LAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 546 V*AVGITAFXXXXXXXXXAG 605
V A+ +TA AG
Sbjct: 185 VWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 132 bits (320), Expect = 5e-30
Identities = 78/212 (36%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 194
S+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
N L+P+++G PD+AFPR+NN+ + I+ NG GTG T
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWT 154
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
+YPPLS +H V L IF LHL+GISS +L LF A
Sbjct: 155 LYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWA 214
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V ITA A AIT+LLTDRNLNTSF
Sbjct: 215 VVITAVLLLLSLPVLAAAITMLLTDRNLNTSF 246
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 129 bits (312), Expect = 5e-29
Identities = 79/215 (36%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
I++TNHK IG LY EL PG L G+ YN I T H
Sbjct: 9 IFTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVL 68
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N VP+++GAPD++FPR+NN F G GT
Sbjct: 69 MLFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGT 128
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVYPPLSS +H G SV L IFS HL GI S LPLF
Sbjct: 129 GWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLF 188
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +V +T+F A AIT+LL DRN NTSF
Sbjct: 189 VWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSF 223
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 125 bits (301), Expect = 1e-27
Identities = 77/215 (35%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N L+PL+LGA D+AF R+NNI F +V GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G TVY PL+ +H G +V LAIFSLHL+G SS ++ +PLF
Sbjct: 131 GWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLF 190
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
AV TA A +T+ + DRN NTSF
Sbjct: 191 AWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSF 225
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 124 bits (299), Expect = 2e-27
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 185
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVPL +G+ D AFPRINN+ F ++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G T+YPPL+S +H G S+ +AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +V ITA A +T+LL DRN NTSF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 124 bits (299), Expect = 2e-27
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 185
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVPL +G+ D AFPRINN+ F ++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G T+YPPL+S +H G S+ +AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +V ITA A +T+LL DRN NTSF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 124 bits (299), Expect = 2e-27
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 185
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVPL +G+ D AFPRINN+ F ++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G T+YPPL+S +H G S+ +AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +V ITA A +T+LL DRN NTSF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 124 bits (299), Expect = 2e-27
Identities = 73/215 (33%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 185
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVPL +G+ D AFPRINN+ F ++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
G T+YPPL+S +H G S+ +AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +V ITA A +T+LL DRN NTSF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSF 237
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 119 bits (287), Expect = 5e-26
Identities = 77/216 (35%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 194
STN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
N L+PL++G PD+AFPR+NNI F I+ G GTG T
Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWT 156
Query: 375 V----YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 542
+ YPPLS +H G SV LAIF+LHL+G+SS +L L
Sbjct: 157 LLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLAL 216
Query: 543 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
F + IT++LTDRN NTSF
Sbjct: 217 F-------GWATWSSRSRYFLGITMVLTDRNFNTSF 245
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 116 bits (279), Expect = 5e-25
Identities = 83/231 (35%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY- 155
STNHKDIGTLY AEL PG + D DQ Y
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92
Query: 156 --NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 329
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 330 XXRXIV----XNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXX 497
V NGAGTG TVY PLS++ G +V +AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 498 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ ++PLFV +V +TAF A AIT+LLTDRN T+F
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTF 262
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 112 bits (269), Expect = 8e-24
Identities = 66/135 (48%), Positives = 75/135 (55%)
Frame = +3
Query: 246 LILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVX 425
L LGAPD FPR N+ F V GAGTG TV PPLS+NIAH G SV
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 426 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 605
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 606 AITILLTDRNLNTSF 650
AIT+LLTDRN+NTSF
Sbjct: 124 AITMLLTDRNINTSF 138
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 105 bits (251), Expect = 1e-21
Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Frame = +3
Query: 108 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 281
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 282 INNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGIS 461
+NN+ + ++ GAG G T YPP+S+ R+V AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 641
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 642 TSF 650
T+F
Sbjct: 323 TTF 325
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 101 bits (243), Expect = 1e-20
Identities = 58/127 (45%), Positives = 67/127 (52%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
+ STNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 8 LXSTNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMI 67
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N LVPL++GAPD+AFPR+NN+ F V GAGTG
Sbjct: 68 FXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGW 127
Query: 372 TVYPPLS 392
TVYPPL+
Sbjct: 128 TVYPPLA 134
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 101 bits (242), Expect = 1e-20
Identities = 63/215 (29%), Positives = 86/215 (40%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
I + NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 16 INTVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVL 75
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N ++PL+LGAP++AFPR+N + F + G G+
Sbjct: 76 MIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGS 135
Query: 366 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
T YPPLS S+ I LH GI S + DQ+ +F
Sbjct: 136 SWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMF 194
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V +T+F AG++ LL DRN NTSF
Sbjct: 195 VWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSF 229
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 95.5 bits (227), Expect = 1e-18
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 1/212 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
S NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
N +PL++ D++ PR+NN+ + G G G T+
Sbjct: 71 FVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTM 130
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*A 554
YPPLS++ G + LA+FSLH+AG+SS F L P+ +
Sbjct: 131 YPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWT 190
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ T+ A +T+LL DR+ +TSF
Sbjct: 191 LFGTSILLVTSVPVLAAGLTLLLLDRHFSTSF 222
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 94.3 bits (224), Expect = 2e-18
Identities = 62/213 (29%), Positives = 82/213 (38%), Gaps = 2/213 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 191
S +HK IG Y EL G L GD Q YN ++T+H
Sbjct: 10 SVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMV 69
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N +P++ G PD+ FPR+NN+ F + G G G
Sbjct: 70 FAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGW 129
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
T+YP L H + +F++HL GISS SF LF+
Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIW 189
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
A ITA AG +T++L DRN NTSF
Sbjct: 190 AALITAILLIITLPVLAGGVTLILCDRNFNTSF 222
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 87.4 bits (207), Expect = 3e-16
Identities = 53/132 (40%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N LVP+++GAPD+AFPR+NNI F V GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 366 G*TVYPPLSSNI 401
G TV LS I
Sbjct: 125 GWTVKCKLSQII 136
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 84.2 bits (199), Expect = 2e-15
Identities = 50/118 (42%), Positives = 60/118 (50%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 291 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISS 464
+ F + G + PL G SV LAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 81.4 bits (192), Expect = 2e-14
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 185
++STNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFL 68
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N VP+++G+PD+AFPR+NNI F +V G G+
Sbjct: 69 MIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGS 128
Query: 366 G*TV 377
G TV
Sbjct: 129 GWTV 132
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 77.4 bits (182), Expect = 3e-13
Identities = 77/209 (36%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Frame = +3
Query: 27 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 203
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 204 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYP 383
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 384 PLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 563
P SS +AH +V L IF LHLAGISS ++ LF
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180
Query: 564 TAFXXXXXXXXXAGAITILLTDRNLNTSF 650
A AIT+L R N SF
Sbjct: 181 XXXXLILSXPVLAAAITMLXXXRXXNXSF 209
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +3
Query: 246 LILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVX 425
L+LGAPD+AFPR+NN+ F +V NGAGTG TVYPPLSS AH G SV
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 426 LAIFS 440
LAI+S
Sbjct: 61 LAIYS 65
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 545 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYII 649
CM C +Y TCFS S+Y IIN K KY I
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFI 131
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 75.4 bits (177), Expect = 1e-12
Identities = 61/219 (27%), Positives = 85/219 (38%), Gaps = 8/219 (3%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ +HKDIG LY EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFL 150
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXN---GAGTG 368
N L+PL++GA D+AFPRIN I F A TG
Sbjct: 151 FATPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTG 209
Query: 369 *TVYPPLS-----SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 533
T+Y PLS N A+ G V L + LHL+G+S+ S+
Sbjct: 210 WTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWAN 267
Query: 534 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
L +F + + AI +LL DRN TSF
Sbjct: 268 LDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSF 306
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 72.9 bits (171), Expect = 6e-12
Identities = 58/213 (27%), Positives = 80/213 (37%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
I S NH D+ LY +L P L D +YN VT H
Sbjct: 4 IMSVNHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMV 61
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N L+P PD+ FPR+N + F ++ + A G
Sbjct: 62 FFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLS-----LLLFSMASAGW 116
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
T YPPLSS SV ++FSLHLAGI+S + L LF
Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCW 170
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
++ + + A IT++LTD++L T F
Sbjct: 171 SIVLVSLLLVLSLPVLAVGITLILTDKHLGTCF 203
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 72.9 bits (171), Expect = 6e-12
Identities = 46/132 (34%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N L+PL+LGA D+AF R+NNI F +V GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 366 G*TVYPPLSSNI 401
G TV SS +
Sbjct: 131 GWTVKKICSSKM 142
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +3
Query: 384 PLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 563
PL+S+IAH G SV +AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 564 TAFXXXXXXXXXAGAITILLTDR 632
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +2
Query: 218 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPY 322
W IWKL P NK YKILT PL Y
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTY 62
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.9 bits (161), Expect = 1e-10
Identities = 44/167 (26%), Positives = 64/167 (38%), Gaps = 1/167 (0%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 333 XRXIVXNG-AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXX 509
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 510 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
++ +LPL + + +TA A +LL DR+ T F
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEF 252
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 67.7 bits (158), Expect = 2e-10
Identities = 48/176 (27%), Positives = 69/176 (39%)
Frame = +3
Query: 123 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 302
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 303 XXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXX 482
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 483 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+F + LFV + AGA+T+L D+ L T+F
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNF 175
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 66.9 bits (156), Expect = 4e-10
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 185
+YSTN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVL 65
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 365
N L+PL++GA D++F R+NNI F +V +GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGT 125
Query: 366 G*TV 377
G TV
Sbjct: 126 GWTV 129
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 66.1 bits (154), Expect = 7e-10
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 6/216 (2%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXX 185
+T+HK IG LY EL G I + IYN +T H
Sbjct: 15 TTSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLI 74
Query: 186 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF-XXXXXXXXXXXXRXIVXNGAG 362
N L+P+++G +++ PR+N I F ++
Sbjct: 75 MLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPIS 134
Query: 363 TG*TVYPPLSSNIAHR-GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 539
+G T+YPPLS+ A G ++ L++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 540 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 647
++ ++ +T+ AIT LL DRN+N++
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINST 230
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 65.7 bits (153), Expect = 9e-10
Identities = 52/214 (24%), Positives = 79/214 (36%), Gaps = 3/214 (1%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXX 188
S NHK IG Y EL G +I D +IYN + T H
Sbjct: 14 SGNHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIM 73
Query: 189 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 368
N L P++LG D+ +PR+N + G+GTG
Sbjct: 74 VFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTG 133
Query: 369 *TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
T+YPPLS+++++ G + IF L AGI+S D++
Sbjct: 134 WTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAA 191
Query: 549 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
++ +T+F ++ DR+ NT F
Sbjct: 192 WSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMF 225
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 65.3 bits (152), Expect = 1e-09
Identities = 52/214 (24%), Positives = 76/214 (35%), Gaps = 1/214 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
I +T+HKDIG LY +L P S Y VT H
Sbjct: 16 ITTTDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIML 75
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGA-GTG 368
N +VPL +GA D+AFPR+N + + +GA G
Sbjct: 76 LWFASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVG 134
Query: 369 *TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
T+Y PL++ I G + LA ++ L +S + ++P+F
Sbjct: 135 WTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFT 194
Query: 549 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
++ T +LL DRNL T F
Sbjct: 195 WSILFTVILMLWAFPPLMVGGALLLLDRNLGTEF 228
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 64.5 bits (150), Expect = 2e-09
Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 4/217 (1%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAX 182
I + NHK +G Y EL + +I + + YN I T H
Sbjct: 9 ITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGI 68
Query: 183 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAG 362
N +P++ G+P++A+PRIN+I G G
Sbjct: 69 IMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGG 128
Query: 363 TG*TVYPPLSSNIAHRGR-SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 539
TG T+YPPLS+++ +V + IF L ++G++S + L
Sbjct: 129 TGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILS 188
Query: 540 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ ++ IT+ G + +LL+D + NT F
Sbjct: 189 VSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLF 225
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 62.9 bits (146), Expect = 6e-09
Identities = 47/186 (25%), Positives = 69/186 (37%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
+ + +HK IG ++ EL PG I D YN + T H
Sbjct: 30 LLTQDHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMI 89
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N L+P+++GA D+AFP++N + F +V GA TG
Sbjct: 90 FLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVALF-GMVQGGADTGW 148
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
T Y P S+ + V L F L G SS + +LPLFV
Sbjct: 149 TFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVW 205
Query: 552 AVGITA 569
++ T+
Sbjct: 206 SIYATS 211
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 62.9 bits (146), Expect = 6e-09
Identities = 53/215 (24%), Positives = 79/215 (36%), Gaps = 2/215 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXX 188
I++T+HK +G LY EL G I DD +YNT + H
Sbjct: 9 IFTTDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAM 68
Query: 189 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 368
N +PL++GA D+AFPR+N + + +
Sbjct: 69 ILAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIM 128
Query: 369 *TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 129 WTGYPPYSI-ITH--GNTAFYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFV 185
Query: 549 *AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSF 650
A + AF G A+T+L D+ + T F
Sbjct: 186 WAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHF 219
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 62.1 bits (144), Expect = 1e-08
Identities = 48/213 (22%), Positives = 75/213 (35%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
+ + +HK IG +Y +L P + +++N + T H
Sbjct: 27 VSTLDHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMV 86
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N VPL++GA D+AFPR+N+ F + + G
Sbjct: 87 FLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGW 145
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
Y PLSS + V I L + GI S S ++PLFV
Sbjct: 146 FSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVW 205
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ + A A+ +LL DR L ++F
Sbjct: 206 MMLMQAILIILALPALNSALAMLLIDRWLGSAF 238
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 62.1 bits (144), Expect = 1e-08
Identities = 48/213 (22%), Positives = 71/213 (33%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
I + +HK +G +Y A+L P + D YN I T H
Sbjct: 48 ITTVDHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMI 107
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N +VPL +GA D+AFP +NN+ F ++ G
Sbjct: 108 IFMAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGW 166
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
T Y PL+SN G + L +AGI + + ++P+F
Sbjct: 167 TSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTW 226
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
IT A+ +L DR F
Sbjct: 227 TTLITMVIIVFAFPVLTVALALLSFDRLFGAHF 259
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 61.7 bits (143), Expect = 1e-08
Identities = 51/209 (24%), Positives = 76/209 (36%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
+ + +HK IG ++ EL PG I D YN T H
Sbjct: 37 LLTVDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMI 96
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N ++PL+LGA D+AFPR+N + ++ G TG
Sbjct: 97 FLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALW-GMLNGGLDTGW 155
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
T Y P S AH +V +F + G SS ++ ++PLFV
Sbjct: 156 TFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVW 212
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNL 638
A+ T+ G + +L+T NL
Sbjct: 213 AIYATS-CIQVLATPVIGLLLVLVTVENL 240
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 61.3 bits (142), Expect = 2e-08
Identities = 49/213 (23%), Positives = 77/213 (36%), Gaps = 2/213 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ +HKDIG LY EL + +YN ++T+H
Sbjct: 65 TVDHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFL 124
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXN--GAGTG* 371
N +PL++ A D+AFPRIN I F ++ A T
Sbjct: 125 FGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSW 183
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
T+Y PLS ++ +V + + LHL G+S+ + L +F
Sbjct: 184 TMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSW 241
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ + A+ +LL DRN T+F
Sbjct: 242 TMLTQSGLILFAFPLFGSALIMLLLDRNFGTTF 274
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 58.4 bits (135), Expect = 1e-07
Identities = 48/211 (22%), Positives = 71/211 (33%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+T+HK IG +Y +LG P + +YN + T H
Sbjct: 28 TTDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFL 87
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
N +VPL++GA D+AFPR+N + V G
Sbjct: 88 GLMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFA 146
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 557
Y PL+ V I + L G++S + +++PLFV
Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQ 206
Query: 558 GITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ AF A LL DR+ T F
Sbjct: 207 LVVAFILIFAFPVLTVATIQLLFDRHFGTRF 237
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 58.0 bits (134), Expect = 2e-07
Identities = 51/215 (23%), Positives = 76/215 (35%), Gaps = 3/215 (1%)
Frame = +3
Query: 15 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 194
++T+ K IG Y EL P + + D +YN + T H
Sbjct: 32 FNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLF 91
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNG-AGTG* 371
N L+P ++GAPD+AFP++N F G A +G
Sbjct: 92 LFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGW 150
Query: 372 TVYPPLS--SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
YPP+S + + H L I ++ L+GISS F ++P+F
Sbjct: 151 WSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVF 210
Query: 546 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V G +LL D + TSF
Sbjct: 211 VWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSF 245
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 57.6 bits (133), Expect = 2e-07
Identities = 56/211 (26%), Positives = 76/211 (36%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
S +HK IG LY L +P + +YN +VT H
Sbjct: 107 SLDHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFF 166
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
N +P+ L D+ PR+N++ + G G G T+
Sbjct: 167 FLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELS--LYYGCGIGWTL 224
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 557
YPPLS G V +FSLHLAG+SS SF+ + V A
Sbjct: 225 YPPLSI-WEGSGFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN-CSIIVWAY 278
Query: 558 GITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
T+ A IT+LL DRN T+F
Sbjct: 279 LFTSVLLLLSLPVLASGITMLLFDRNFGTAF 309
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 57.6 bits (133), Expect = 2e-07
Identities = 53/212 (25%), Positives = 70/212 (33%)
Frame = +3
Query: 15 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 194
+ +HK IG Y EL P ++YN ++T H
Sbjct: 23 FCVDHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIF 82
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
N L+PL++G D+AFPR+N + F V G T
Sbjct: 83 LWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWT 140
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
YPPLS G L I SL L G SS +PLF A
Sbjct: 141 SYPPLSLLSGKWGEE--LWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWA 198
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ T+ A A+ +L D TSF
Sbjct: 199 MLATSSLILLSTPVLASALILLSFDLIAGTSF 230
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 57.6 bits (133), Expect = 2e-07
Identities = 47/208 (22%), Positives = 72/208 (34%), Gaps = 1/208 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+T+HK +G +Y AEL PG ++ +N + T H
Sbjct: 35 TTDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLL 94
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT-G*T 374
N ++PL +GAPD+AFPR+N F + GA G T
Sbjct: 95 YGTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWT 153
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
+Y PLS I G + I + GI S + ++P+F
Sbjct: 154 MYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWN 213
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNL 638
+ + + A +L DR L
Sbjct: 214 IFVVSVLALLIFPLLLAAALGVLYDRKL 241
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 56.4 bits (130), Expect = 6e-07
Identities = 43/172 (25%), Positives = 66/172 (38%), Gaps = 4/172 (2%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 327 XXXRXIV-XNGAGTG*TVYPPLS---SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXX 494
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 495 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ +LPL + A+ ITA A ++L DR + T F
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGF 257
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 55.2 bits (127), Expect = 1e-06
Identities = 45/212 (21%), Positives = 71/212 (33%), Gaps = 1/212 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ +HK IG +Y +L P + + YN I+T H
Sbjct: 21 TVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFF 80
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGA-GTG*T 374
N +VPL+LGA D+A PR+N + GA G T
Sbjct: 81 FIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWT 140
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
Y P S A V + ++ L G SS S ++P++V +
Sbjct: 141 FYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWS 197
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
V + A ++L +R + S+
Sbjct: 198 VFAASVLNLFSLAGLTAATLLVLLERKIGLSW 229
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 54.0 bits (124), Expect = 3e-06
Identities = 50/212 (23%), Positives = 72/212 (33%), Gaps = 1/212 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXX 194
+ +HK IG Y +L P + IG D+ YN I T H
Sbjct: 26 TVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMF 84
Query: 195 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 374
LVPL++G IAFPR+N + V G G
Sbjct: 85 LFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWF 143
Query: 375 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 554
Y PLS G+ + + +S+ S D++PLFV +
Sbjct: 144 AYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWS 203
Query: 555 VGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ +T+F A T L+ DR + T F
Sbjct: 204 MLVTSFLVILAMPAIMIASTSLILDRLVGTHF 235
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = +3
Query: 342 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISS 464
+V G G G TVYPPL+S + H G SV AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 54.0 bits (124), Expect = 3e-06
Identities = 46/213 (21%), Positives = 73/213 (34%), Gaps = 2/213 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+TNHKDIG LY EL + G+ + YN V+ H
Sbjct: 19 TTNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFW 78
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
N LVPL +GA D+AFPR+N + + G T+
Sbjct: 79 FISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTM 137
Query: 378 YPPLS--SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
Y PL+ + I G + +L + + +P+F
Sbjct: 138 YAPLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSL 197
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
++ +T + A+ IL +D L T++
Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTTY 230
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 51.6 bits (118), Expect = 2e-05
Identities = 50/208 (24%), Positives = 75/208 (36%), Gaps = 1/208 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXX 188
++ST+H D+G LY AEL PG+ I D +N + T H
Sbjct: 15 MFSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHG-TT 73
Query: 189 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 368
N VP+++ D+A+P++N I F + T
Sbjct: 74 LIFLFILPFASAVGNYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT- 132
Query: 369 *TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
PP S I+ G + + IF L + GISS S Q+PL
Sbjct: 133 ----PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLA 187
Query: 549 *AVGITAFXXXXXXXXXAGAITILLTDR 632
+ ++ A A+ +LLTDR
Sbjct: 188 WSYLSSSLIVLVALPTFAAALLMLLTDR 215
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 50.4 bits (115), Expect = 4e-05
Identities = 42/174 (24%), Positives = 66/174 (37%), Gaps = 4/174 (2%)
Frame = +3
Query: 141 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 320
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 321 XXXXXRXIVXNGAGTG*-TVYPPLSS---NIAHRGRSVXLAIFSLHLAGISSXXXXXXXX 488
+ G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 489 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
SF +LPL + A ITA A +L+ DR+L TSF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSF 271
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 49.2 bits (112), Expect = 8e-05
Identities = 49/214 (22%), Positives = 71/214 (33%), Gaps = 3/214 (1%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIG--DDQIYNTIVTAHAXXX 188
S +HK IG +Y +L G G + Y+ I TAH
Sbjct: 52 SVDHKKIGVMYIIVAMIMLLRGFADALMMRTQLAMATGGAHGVFPPEHYDQIFTAHGVIM 111
Query: 189 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 368
N +VPL +GA D+AFP +N++ F V N A TG
Sbjct: 112 IIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTG 170
Query: 369 *TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
YPPL+ V I++L ++GI + +P+F
Sbjct: 171 WVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFT 230
Query: 549 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
GA+ +L DR L+ F
Sbjct: 231 WTCTWANVLIATSFPILTGALAMLALDRYLDFHF 264
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 48.4 bits (110), Expect = 1e-04
Identities = 37/140 (26%), Positives = 44/140 (31%)
Frame = +2
Query: 224 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKXNCXKWCRNRMNSLPPTFI*YR 403
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 404 T*RKIRXSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXX 583
T R +F T CM +YS
Sbjct: 122 TLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTS 181
Query: 584 XTTCFSWSYYNIINRSKLKY 643
+ S+YNI K KY
Sbjct: 182 FSPSIGSSHYNITYWPKPKY 201
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 48.4 bits (110), Expect = 1e-04
Identities = 39/211 (18%), Positives = 70/211 (33%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ +HK I LY +L P + Q YN ++T H
Sbjct: 21 TVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFL 80
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
N +VPL +GA D++FP +N + F + G T
Sbjct: 81 AAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTS 139
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 557
Y LS + +G + + L ++G+ + ++ +LPLF
Sbjct: 140 YASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTT 197
Query: 558 GITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ + + +++ DR T+F
Sbjct: 198 FVASALILFAFPPLTVGLALMMLDRLFGTNF 228
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 47.6 bits (108), Expect = 3e-04
Identities = 50/218 (22%), Positives = 74/218 (33%), Gaps = 5/218 (2%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSL-IGDDQIYNTIVTAHAXXX 188
++S + K I Y +LG PG+ D Y +T H
Sbjct: 33 VFSQDAKVIAIQYSLTASAIGLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIM 92
Query: 189 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNG-AGT 365
N L+PL++GA D+ FP +N + + V G G
Sbjct: 93 VIYLLTALFLGGFGNYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGA 152
Query: 366 G*TVYPP--LSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 539
G T+YPP + S + + L + SL L I + +LP
Sbjct: 153 GWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLP 212
Query: 540 LFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
L V + T G++ +LL DR L TSF
Sbjct: 213 LTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSF 249
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +3
Query: 3 RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAH 176
+K +Y+ NHK I Y EL +P S GD Y +VTAH
Sbjct: 52 KKYVYTINHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAH 111
Query: 177 AXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
N L+P +G+ D+A+PR+N+I F
Sbjct: 112 GLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 47.2 bits (107), Expect = 3e-04
Identities = 37/184 (20%), Positives = 61/184 (33%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ NH D+G ++ A+L P S + YN + T H
Sbjct: 26 TVNHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFL 85
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
L+P +LG+ D+AFPR+ F + +G +
Sbjct: 86 FAIPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFM 144
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 557
YPPLSS + G + + + IS+ S ++P+F
Sbjct: 145 YPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYA 204
Query: 558 GITA 569
+TA
Sbjct: 205 LVTA 208
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 46.8 bits (106), Expect = 5e-04
Identities = 49/217 (22%), Positives = 75/217 (34%), Gaps = 6/217 (2%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGN--PGSLIGD---DQIYNTIVTAHAX 182
+TN IG LY + N PGS + D + +Y ++ H
Sbjct: 11 TTNAHYIGILYILLSIINFVLAGIAAMYMRLTIANTPPGSPVQDPFNELLYTWFMSLHGL 70
Query: 183 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIV-XNGA 359
N LVP ++GAPD+ +PRIN + F + +G
Sbjct: 71 GMLLLFAMQAVAGAA-NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGD 129
Query: 360 GTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 539
G T+YPPLS+ + V L + + +AG SS +
Sbjct: 130 SIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMS 187
Query: 540 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
LF +V + A +LL +R+L F
Sbjct: 188 LFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHF 224
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 45.2 bits (102), Expect = 0.001
Identities = 47/213 (22%), Positives = 69/213 (32%), Gaps = 2/213 (0%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAE--LGNPGSLIGDDQIYNTIVTAHAXXXX 191
ST+HK IG +Y A+ +G G + D + + + H
Sbjct: 73 STDHKKIGIMYVVLALVMLTRAIAEAVLMRAQGAVGLGGGFLSSDH-FAQLFSTHGTIMI 131
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 371
N +VPL +GA D+AFP +N+I +V + G
Sbjct: 132 FFMAMPFLTGLI-NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGW 190
Query: 372 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 551
YPP + + + G V I+SL LA + S +PLF
Sbjct: 191 FGYPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTW 250
Query: 552 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
TA L DR L+ F
Sbjct: 251 TALCTAIMMIFAMPPLTVVTLQLALDRYLDFHF 283
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 548 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYII 649
M C +YS +TC WSYYN IN SKLKYI+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYIL 117
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 44.8 bits (101), Expect = 0.002
Identities = 43/211 (20%), Positives = 68/211 (32%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ +HK IG Y +L P + + Y+++ T H
Sbjct: 46 TVDHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFL 105
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
N L PL+LG+ D+AFPR+ + + G
Sbjct: 106 YALPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFN 164
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 557
Y PL+S G ++ + + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 558 GITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+ + A +L DRN T F
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHF 255
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 44.8 bits (101), Expect = 0.002
Identities = 47/213 (22%), Positives = 70/213 (32%), Gaps = 5/213 (2%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAEL-----GNPGSLIGDDQIYNTIVTAHAX 182
+ +HK IG +Y +L G+ G L + Y+ I TAH
Sbjct: 51 TVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLAAATGGSEGYL--PPEHYDQIFTAHGV 108
Query: 183 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAG 362
N VPL +GA D+AFP +N++ F V A
Sbjct: 109 IMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAK 167
Query: 363 TG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 542
TG YPPL+ G V I++L L+G+ + +P+
Sbjct: 168 TGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPI 227
Query: 543 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 641
F A+ +L DR L+
Sbjct: 228 FTWTCTWANVLIVASFPILTAALALLTVDRYLD 260
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 44.0 bits (99), Expect = 0.003
Identities = 32/176 (18%), Positives = 60/176 (34%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ NH D+G ++ A+L +P S + Y + T H
Sbjct: 26 TVNHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFL 85
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
L+P +LG+ D+A+PR++ F + +G +
Sbjct: 86 FAIPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFM 144
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
YPPL+S + G + + + IS+ S D++P++
Sbjct: 145 YPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 42.7 bits (96), Expect = 0.007
Identities = 34/146 (23%), Positives = 47/146 (32%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+T+HK IG LY +L P + YN ++T HA
Sbjct: 29 TTDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFF 88
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
N +PL LG D+A PR+N G T
Sbjct: 89 FLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTF 148
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAG 455
Y PL+ + G SV + L+ G
Sbjct: 149 YYPLTMDGNQTGVSVFMVAVILNGLG 174
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 42.3 bits (95), Expect = 0.010
Identities = 52/224 (23%), Positives = 73/224 (32%), Gaps = 11/224 (4%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG------SLIG----DDQIYNT 161
I++TNHK IG LY +L P S+ D YN
Sbjct: 27 IFTTNHKQIGLLYILTSLFFFIGGGVMALLMRVQLAIPRYDLVKYSIFSGRFLDALQYNQ 86
Query: 162 IVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRX 341
+VT H L+PL +G+ D+ +PR+N + +
Sbjct: 87 LVTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGF 145
Query: 342 IVXNG-AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 518
+ G TG TVY PLSS A ++ L GI +
Sbjct: 146 FLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKG 205
Query: 519 XSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
LPLFV AV A G +LL ++ S+
Sbjct: 206 YRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASY 249
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 41.1 bits (92), Expect = 0.022
Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 4/217 (1%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 191
+ + +HK IG +Y +L PG + + +N + T HA
Sbjct: 24 VATVDHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMI 83
Query: 192 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAG--- 362
N +PL++GA D+AFPR+N + ++ G
Sbjct: 84 FLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVP 142
Query: 363 -TG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 539
G Y L+S G L L GI + + ++P
Sbjct: 143 DIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMP 202
Query: 540 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+FV +T+ A+ +L+ DR +F
Sbjct: 203 VFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANF 239
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 41.1 bits (92), Expect = 0.022
Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 3/171 (1%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 327 XXXRXIVXNGAGTG*TVYP---PLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXX 497
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 498 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
+F +LP+ + + ITA + + DR T F
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCF 260
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 40.7 bits (91), Expect = 0.030
Identities = 25/106 (23%), Positives = 43/106 (40%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHR 410
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 411 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
V +S+ ++GI + F+++ +F+
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFM 224
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.039
Identities = 28/78 (35%), Positives = 36/78 (46%)
Frame = +3
Query: 411 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 590
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 591 XXXAGAITILLTDRNLNT 644
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 39.5 bits (88), Expect = 0.068
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 179
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 39.1 bits (87), Expect = 0.090
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 179
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 158
++STNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 38.3 bits (85), Expect = 0.16
Identities = 40/183 (21%), Positives = 66/183 (36%), Gaps = 5/183 (2%)
Frame = +3
Query: 117 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 296
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 297 FXXXXXXXXXXXXRXIVXNGAG-TG*TVYPPLSS--NIAHRGRSVXLAIFSLHLA--GIS 461
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 641
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 642 TSF 650
TSF
Sbjct: 254 TSF 256
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 37.5 bits (83), Expect = 0.28
Identities = 33/185 (17%), Positives = 60/185 (32%)
Frame = +3
Query: 18 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 197
+ +H+ +G + +L P + + YN + T H
Sbjct: 52 AVSHRAVGKRFLITGFIFFLIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFL 111
Query: 198 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 377
L+PL++GA D+ FPR+ + + G +
Sbjct: 112 FAIPMLEGFAVY-LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFM 170
Query: 378 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 557
Y PLS++ G S + + LA I+S S ++P+ + +
Sbjct: 171 YVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYL 230
Query: 558 GITAF 572
TAF
Sbjct: 231 LATAF 235
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 37.1 bits (82), Expect = 0.36
Identities = 35/180 (19%), Positives = 59/180 (32%)
Frame = +3
Query: 111 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 290
+L P + D + YN + + H ++PL+LG D+ FPR+N
Sbjct: 64 QLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTFPRLNA 122
Query: 291 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXX 470
+ ++ G YPPL+ G + + IS+
Sbjct: 123 FGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVTFMEISALV 182
Query: 471 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
S +++P+FV AV + +F A +L DR F
Sbjct: 183 AAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHF 242
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 35.9 bits (79), Expect = 0.84
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 158
++STNHKDIGT Y EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 8 MNLFYKS*RYWNIIFYFWYLIRNNWNIFKTFNS 106
M + KS YWNI+F+FWYLI ++ K NS
Sbjct: 339 MIILNKSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIV 167
+YSTN KDI LY EL PGS L G+ Q++N +V
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 33.1 bits (72), Expect = 5.9
Identities = 38/187 (20%), Positives = 58/187 (31%), Gaps = 1/187 (0%)
Frame = +3
Query: 12 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIGDDQIYNTIVTAHAXXX 188
I + N++ IG LY +L P L+G D YN I T H
Sbjct: 34 ISAVNNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTM 92
Query: 189 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 368
L+P +L A D+ FPR++ G
Sbjct: 93 MFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGG 151
Query: 369 *TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
+YPPL+ G + + + IS+ S ++P+F
Sbjct: 152 WFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFA 211
Query: 549 *AVGITA 569
A+ I A
Sbjct: 212 WAMLIFA 218
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 528 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 650
DQ+ LF ++ IT AG IT+LL+DRN N F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFF 52
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 631 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 509
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 224 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKXNCXKWCRNRMNSLPPTFI*YR 403
+W L P N+ ++L L + + K CRNRMN+LP
Sbjct: 28 LWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNS 87
Query: 404 T*RKIRXSCYFFTTFS 451
R + YFF+T S
Sbjct: 88 PRRSVSSPRYFFSTSS 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,346,870
Number of Sequences: 1657284
Number of extensions: 6781995
Number of successful extensions: 15788
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 14456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15582
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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