Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_P02
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 235 PSLCIXSIASFKALLYFWFLSVSCSIS 155
           P+L + ++  F    Y W L + C+I+
Sbjct: 162 PTLKLFALHEFYGFCYLWVLILICNIA 188


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = +3

Query: 114 DNDYHQEIARSAFADMLHDTERNQKYSKALKLAIXKMHNDGKKAN 248
           DND   ++    ++D+L  T+ N+ +             D K AN
Sbjct: 341 DNDEVLQVLEDIYSDLLDLTDNNELFHLGSDEVNLTCWQDTKSAN 385


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
 Frame = +3

Query: 195 KALKLAIXKMHNDGKKANVLDIGTGTGLLSIM-----AAKSGADTIVACEAFQPMAECCL 359
           K L + I    NDG    ++D G G     ++      AKSG    +  EA Q  A+  +
Sbjct: 67  KELYIKIIPNKNDGT-LTIIDTGIGMTKADLVHNLGTIAKSGTKAFM--EALQAGADISM 123

Query: 360 ------RILECNGVADKVTVIPKRSTE 422
                        VADKVTV+ K + +
Sbjct: 124 IGQFGVGFYSAYLVADKVTVVSKNNDD 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,827
Number of Sequences: 336
Number of extensions: 2914
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)