Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P02
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 52 1e-07
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 44 1e-05
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 30 0.25
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 29 0.77
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 28 1.0
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 27 2.4
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 26 4.1
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 26 5.5
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 25 7.2
SPCPB16A4.04c |trm8||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 25 7.2
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 25 7.2
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 25 9.5
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 25 9.5
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 51.6 bits (118), Expect = 1e-07
Identities = 41/150 (27%), Positives = 70/150 (46%)
Frame = +3
Query: 156 DMLHDTERNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 335
+ML D R Y A+ + H K VLD+G GTG+LS+ A++GA + +
Sbjct: 31 EMLKDDVRTLSYRDAI---MQNPHLFRDKI-VLDVGCGTGILSMFCARAGAKHVYGVD-M 85
Query: 336 QPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQKANILVTEXFDTELIGEGAL 515
+ ++I+E N ++D++T+I + E+ + +K +I+V+E L+ E L
Sbjct: 86 SEIIHKAVQIVEVNKLSDRITLIQGKMEEIQL-----PVEKVDIIVSEWMGYFLLYESML 140
Query: 516 STFSHAHKFLLQQXAIXVPDSXVIYAQVVE 605
T A L + PD I +E
Sbjct: 141 DTVLVARDRYLAPDGLLFPDRAQIQLAAIE 170
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 44.4 bits (100), Expect = 1e-05
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Frame = +3
Query: 108 DEDNDYHQEIARSAFAD-MLHDTERNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLS 284
D D+ Y + A + ML+D+ R + Y H K VLD+G GTG+LS
Sbjct: 215 DNDSYYFESYAGNDIHFLMLNDSVRTEGYRD---FVYHNKHIFAGKT-VLDVGCGTGILS 270
Query: 285 IMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQKAN 464
+ AK+GA + A + + E NG+AD++T I + ++++ K +
Sbjct: 271 MFCAKAGAKKVYAVDNSDIIQMAISNAFE-NGLADQITFIRGKIEDISLPVG-----KVD 324
Query: 465 ILVTEXFDTELIGEGALSTFSHAHKFLLQQXAIXVP 572
I+++E L E + + A L I P
Sbjct: 325 IIISEWMGYALTFESMIDSVLVARDRFLAPSGIMAP 360
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 30.3 bits (65), Expect = 0.25
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 249 VLDIGTGTGLLSIMAAKSGA 308
VL++G GTGL+SI+ AK G+
Sbjct: 174 VLELGAGTGLVSILCAKMGS 193
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 28.7 bits (61), Expect = 0.77
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 234 GKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMA 347
GKK +LDIG G G+LS A+ GA ++ A +A PMA
Sbjct: 78 GKK--ILDIGCGGGILSESMARLGA-SVTAVDA-SPMA 111
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 401 NSYLISHTIAFQYPETAFSHRLKSLTSNNSV 309
NS ++ + Q E FSH++K LTS N +
Sbjct: 290 NSLIMEYKNELQSAEEHFSHKIKELTSENEL 320
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 356 TAFSHRLKSLTSNNSVST*FCCHYGEEPCTCANI 255
++ SHR K LTS++++ FC G+ P +I
Sbjct: 307 SSLSHRRKLLTSHSTLKICFCRSRGDPPIVLESI 340
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 201 LKLAIXKMHNDGKKANVLDIGTGTGLLSIMAA 296
L + K + N L++G GTGL+ I AA
Sbjct: 123 LSANLPKWEDLSNSINALELGAGTGLVGISAA 154
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 39 GSKMKVFTQKRNPLTGCTEWDMQDEDNDYHQEIARSAF 152
G ++KV++ L C D +ED D ++AR+AF
Sbjct: 37 GGRVKVYSPSTEKLI-CEVADADEEDVDIAVKVARAAF 73
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 168 DTERNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLS 284
D +RN + L I K N +LD+G G G+L+
Sbjct: 10 DYQRNASFVPKLTKDIVKRINLSSSDELLDLGCGDGVLT 48
>SPCPB16A4.04c |trm8||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 273
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 237 KKANVLDIGTGTGLLSIMAAKSGADTIV 320
KK ++DIG G G L++ DT+V
Sbjct: 80 KKVEIVDIGCGYGGLTVALGPQFPDTLV 107
>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 531
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 494 VNWGRSSVNILSCAQVPITTXCY 562
V WG + + ++SC +PI Y
Sbjct: 495 VGWGSTILGVISCIMIPIPFLIY 517
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 94 SGICKMKTTIITKRSPDQPSLICCMILR 177
SGI ++ T+++ PD P +I MI+R
Sbjct: 886 SGIASIRGTLMSSVLPDAPLIIRDMIIR 913
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 45 KMKVFTQKRNPLTGCTEWDMQDEDNDYHQEIARSAFADMLHDTERNQKYSKALKL 209
K K QK+ +TG + D Q DN+ + + S D D + +K + LKL
Sbjct: 100 KKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKNID--DDIDEIEKAAAELKL 152
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,547,327
Number of Sequences: 5004
Number of extensions: 49791
Number of successful extensions: 144
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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