Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P02
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0038 + 375893-376093,376758-376883,376978-377177,377411-37... 81 8e-16
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 59 3e-09
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 56 2e-08
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 56 3e-08
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 51 9e-07
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 50 1e-06
09_03_0035 - 11765108-11765376,11765909-11766005,11766505-117665... 32 0.35
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 31 1.1
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 30 1.4
05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 29 3.2
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 29 4.3
03_06_0075 - 31481395-31481452,31481675-31481964,31482068-314821... 29 4.3
02_02_0106 + 6814391-6817007,6817086-6817462 29 4.3
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 28 5.6
02_02_0109 + 6830802-6833412,6833491-6833861 28 7.5
11_05_0078 - 18906900-18907082,18907104-18907337,18907429-189076... 27 9.9
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 27 9.9
01_03_0282 - 14580875-14580891,14582126-14585855 27 9.9
>06_01_0038 +
375893-376093,376758-376883,376978-377177,377411-377502,
377966-378222,378610-378846,378986-379063,380422-380571,
380646-380720,381109-381205,381289-381341
Length = 521
Score = 81.0 bits (191), Expect = 8e-16
Identities = 43/121 (35%), Positives = 69/121 (57%)
Frame = +3
Query: 279 LSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQK 458
L+ + ++ ++ ACE++ PM + R+L NG+ ++V V KRS EL V + D+
Sbjct: 6 LAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMENRVKVFHKRSDELKVRD--DLDSP 63
Query: 459 ANILVTEXFDTELIGEGALSTFSHAHKFLLQQXAIXVPDSXVIYAQVVECPILXKWNKLN 638
A+ILV+E D+EL+GEG + T A+ LL + VP Y Q+VE L K + L+
Sbjct: 64 ADILVSEILDSELLGEGLIPTLQQAYDMLLAKNPKIVPYRATTYGQLVESTFLWKLHDLH 123
Query: 639 D 641
+
Sbjct: 124 N 124
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 58.8 bits (136), Expect = 3e-09
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Frame = +3
Query: 156 DMLHDTERNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 335
+ML D R + Y AL L + N A VLD+G GTG+LS+ AAK+GA ++A +
Sbjct: 268 EMLGDKVRTEAYRDAL-LGNPSLMNG---ATVLDVGCGTGILSLFAAKAGASRVIAVDGS 323
Query: 336 QPMAECCLRILECNGVA--DKVTVIPKRSTEL-----TVGENGDMK-----QKANILVTE 479
M + + NG + + + KR T++ T E + K K ++LV+E
Sbjct: 324 AKMVSVATEVAKSNGFLYDENMEMQQKRDTQVITVVHTKAEELNHKIQVPSNKFDVLVSE 383
Query: 480 XFDTELIGEGALSTFSHAHKFLLQQXAIXVPDSXVIY 590
L+ E LS+ +A L+ +PD+ I+
Sbjct: 384 WMGYCLLYESMLSSVLYARDHFLKPGGAILPDTATIF 420
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Frame = +3
Query: 150 FADMLHDTERNQKYSKA--LKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVA 323
+ +LH Q + + A+ + +D + V+D+G G+G+LS+ AA++GA + A
Sbjct: 175 YGQLLHQQNMLQDFVRTGTYYAAVMENRSDFEGRVVVDVGAGSGILSLFAAQAGARHVYA 234
Query: 324 CEAFQPMAECCLRILECN-GVADKVTVIPKRSTELTVGENGDMKQKANILVTEXFDTELI 500
EA + MAE R++ N + ++TVI + E+ ++ +KA+IL++E T L+
Sbjct: 235 VEASE-MAEHAQRLISGNPSLGQRITVIKGKVEEV------ELPEKADILISEPMGTLLV 287
Query: 501 GEGALSTFSHAH-KFLL 548
E L ++ A +FL+
Sbjct: 288 NERMLESYVIARDRFLV 304
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Frame = +3
Query: 102 MQDEDNDYHQEIARSAFAD-MLHDTERNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGL 278
+ + D Y Q + + M+ D R Y A+ + +GK V+D+G GTG+
Sbjct: 41 LAEHDRIYFQSYSHIGIHEAMIKDRVRTDAYRSAIMH--HQKFIEGKV--VMDVGCGTGI 96
Query: 279 LSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQK 458
LS+ A++GA + A EA + MA I++ N + DKV V+ R E+ +++ K
Sbjct: 97 LSVFCARAGAKCVYAVEASE-MATQAREIVKANNLDDKVVVVHGRV------EDVEVEDK 149
Query: 459 ANILVTEXFDTELIGEGALSTFSHAHKFLLQQXAIXVPDSXVIY 590
+++++E L+ E L + A L+ + +P ++
Sbjct: 150 VDVIISEWMGYMLLYESMLPSVLFARDKWLKPGGLILPSHATLF 193
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 50.8 bits (116), Expect = 9e-07
Identities = 47/163 (28%), Positives = 76/163 (46%)
Frame = +3
Query: 156 DMLHDTERNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 335
+ML D R Y A+ H+ K VLD+GTG+G+L+I +A++GA + A EA
Sbjct: 44 EMLCDRVRMDAYHSAV---FRNAHHFRGKV-VLDVGTGSGILAIWSAQAGARKVYAVEAT 99
Query: 336 QPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQKANILVTEXFDTELIGEGAL 515
MAE + N VAD V VI + S E V + +K +++++E L+ E
Sbjct: 100 N-MAEHARELARANDVADIVEVI-QGSMEDVV-----LPEKVDVIISEWMGYFLLRESMF 152
Query: 516 STFSHAHKFLLQQXAIXVPDSXVIYAQVVECPILXKWNKLNDL 644
+ A L+ + P ++ + + NK+ DL
Sbjct: 153 DSVICARDRWLKPDGVMYPSHARMWLAPIRSDLAE--NKMEDL 193
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Frame = +3
Query: 249 VLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIPKRST--E 422
VLD+G GTG+LSI A +GA + A +A +A + I+ N ++DKV V+ R
Sbjct: 85 VLDVGCGTGVLSIFCAFAGAARVYAVDA-SDIALQAMEIVRENELSDKVIVLHGRIEYYY 143
Query: 423 LTVGENGD--MKQKANILVTEXFDTELIGEGALSTFSHAHKFLLQQXAIXVPDSXVIY 590
+ + EN D +++K +++++E L+ E L + A L+ + +P +Y
Sbjct: 144 IRIFENQDVEIEEKVDVIISEWMGYMLLYESMLGSVIFARDKWLKPGGLILPSHASLY 201
>09_03_0035 -
11765108-11765376,11765909-11766005,11766505-11766579,
11767367-11767650,11768466-11768562
Length = 273
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = +2
Query: 233 WKESQCLGYWHRYRA---PLHNG 292
W + C+G WH+YRA LHNG
Sbjct: 110 WHKDDCVGEWHKYRACLEKLHNG 132
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = +3
Query: 189 YSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLR-- 362
+S+A + H D K GT ++ A K G+ T+ A A+ CL+
Sbjct: 211 FSQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGK-GSATLSMAYAGAVFADACLKGL 269
Query: 363 -----ILECNGVADKVTVIPKRSTELTVGENG 443
++EC+ V VT +P ++++ +G+NG
Sbjct: 270 NGVPDVVECSFVQSTVTELPFFASKVRLGKNG 301
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 225 HNDGKKANVLDIGTGTGLLSIMAAKSG 305
+ D + +VLDIGTG+G LS AK G
Sbjct: 167 NKDLRSCSVLDIGTGSGRLSQQLAKQG 193
>05_05_0352 +
24328117-24328303,24328451-24328559,24330634-24330692,
24331139-24331220,24331361-24331481,24331751-24332278,
24332724-24332831,24332934-24333131,24334043-24334234,
24336116-24336199,24336385-24336525,24336683-24336748,
24336880-24337047,24337134-24337463,24337568-24337666
Length = 823
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 252 LDIGTGTGLLSIMAAKSGA 308
LD GTGTG+L I A K GA
Sbjct: 666 LDYGTGTGVLGIAALKMGA 684
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +3
Query: 297 KSGADTIVACEAFQPMAECCLR-------ILECNGVADKVTVIPKRSTELTVGENG 443
++G +V A A+ CLR I+EC+ VA +VT +P ++++ +G G
Sbjct: 264 QNGGTEVVEAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCG 319
>03_06_0075 -
31481395-31481452,31481675-31481964,31482068-31482141,
31483099-31483351
Length = 224
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 87 CTEWDMQDEDNDYHQEIARSAFADMLHDTERNQKY 191
C+ WD E N QE+ + A M+ D+E + +Y
Sbjct: 96 CSCWDAYFELNKLEQELPKEEIARMVKDSEGDPRY 130
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 9 DRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDM 104
+RF + + KMKVF N L+G WD+
Sbjct: 468 NRFSGPIPTLAGKMKVFRAANNLLSGEIPWDL 499
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 210 AIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVAC-EAFQPMAECCLRILECNGVA 386
A+ K DG V++ G G ++ A +GA AC + + + ++EC+ V
Sbjct: 229 ALTKRTQDGG-TEVVEAKAGKGSATLSMAYAGAVFANACLKGLNGVPD----VVECSFVQ 283
Query: 387 DKVTVIPKRSTELTVGENG 443
VT +P ++++ +G+NG
Sbjct: 284 STVTELPFFASKVKLGKNG 302
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 9 DRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDMQDEDNDYHQEIARSAFADML 164
++F + + KMKVF N L+G WD+ +++R+ + L
Sbjct: 468 NKFSGPIPTLAGKMKVFIAANNLLSGEIPWDLTGISQVTEVDLSRNQISGSL 519
>11_05_0078 -
18906900-18907082,18907104-18907337,18907429-18907653,
18907739-18907909,18907994-18908109,18908215-18908369,
18908450-18908573,18909007-18909107,18909215-18909297,
18909383-18909607,18909694-18909810,18910488-18910640
Length = 628
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 416 RSFWDNSYLISHTIAFQYPETAFSHR 339
+S W + IS +FQYP T+ HR
Sbjct: 129 KSSWSDESKISENKSFQYPHTSSVHR 154
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 243 ANVLDIGTGTGLLSIMAAKSGAD 311
+ V+++G GT L ++AAK GAD
Sbjct: 83 STVVELGAGTSLPGLVAAKVGAD 105
>01_03_0282 - 14580875-14580891,14582126-14585855
Length = 1248
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 240 KANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLRILE 371
K L++ TGL + + SGA ++ C AFQ + + L+ L+
Sbjct: 802 KLPALEVLHLTGLNKLQSLCSGASDVIMCSAFQKLKKLKLQHLK 845
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,879,802
Number of Sequences: 37544
Number of extensions: 308433
Number of successful extensions: 785
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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