Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_P02
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical ... 158 3e-39
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 53 2e-07
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 32 0.41
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 31 0.94
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 31 0.94
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 30 1.2
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 30 1.6
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 30 1.6
AF016420-6|AAB65311.3| 530|Caenorhabditis elegans Udp-glucurono... 30 1.6
U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf (diva... 29 2.9
Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical p... 29 3.8
U97008-7|AAB52313.1| 385|Caenorhabditis elegans Temporarily ass... 28 5.0
Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm rece... 28 6.7
>AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical
protein W06D4.4 protein.
Length = 630
Score = 158 bits (384), Expect = 3e-39
Identities = 91/202 (45%), Positives = 121/202 (59%), Gaps = 2/202 (0%)
Frame = +3
Query: 54 VFTQKRNPLTGCTEWDMQDEDNDYHQEIARSAFADMLHDTERNQKYSKALKLAIX--KMH 227
+F +K N TG EW + +ED D QE+ARS F DM+ D +RN K+ LK I K
Sbjct: 1 MFLEKINQKTGEREWVVAEEDYDMAQELARSRFGDMILDFDRNDKFLAGLKTTIAEKKHE 60
Query: 228 NDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLRILECNGVADKVTVIP 407
N K +VLDIGTGTGLLS+MAA+ GAD + A E F+PM +C I + +DK+TVI
Sbjct: 61 NTDGKVHVLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSNSPWSDKITVIS 120
Query: 408 KRSTELTVGENGDMKQKANILVTEXFDTELIGEGALSTFSHAHKFLLQQXAIXVPDSXVI 587
+RST+ V + G +A+I+V E FDTELIGEGAL TF A + L + VP + +
Sbjct: 121 ERSTD--VSQIGG--SRADIIVAEVFDTELIGEGALRTFKEALERLAKPGCRVVPSTGNV 176
Query: 588 YAQVVECPILXKWNKLNDLPDE 653
Y VE +L +N + L E
Sbjct: 177 YIVPVESHLLKMFNDIPRLNGE 198
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 69.7 bits (163), Expect = 2e-12
Identities = 47/150 (31%), Positives = 73/150 (48%)
Frame = +3
Query: 159 MLHDTERNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQ 338
M++D +RN+ ++KAL I + V DIG+GTG+LS +AA+ + + A E
Sbjct: 145 MINDVKRNEAFAKALNDTIKS-----RITVVFDIGSGTGILSAIAARK-TNLVTALEENM 198
Query: 339 PMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQKANILVTEXFDTELIGEGALS 518
+ +L+ NGV +V V K ST E KA+I+V+E D + GE +
Sbjct: 199 CLTMISKEVLKRNGVESRVNVHAKNSTYFETCE------KADIVVSETLDCCVFGEKIVE 252
Query: 519 TFSHAHKFLLQQXAIXVPDSXVIYAQVVEC 608
TF AH I +P +Y ++ C
Sbjct: 253 TFLDAHVRFSHDRTIFIPHQATVYVRLFSC 282
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 52.8 bits (121), Expect = 2e-07
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = +3
Query: 156 DMLHDTERNQKYSKALKLAIXKMHNDG--KKANVLDIGTGTGLLSIMAAKSGADTIVACE 329
+ML D R Y ++ HN K V+D+G+GTG+LS+ AAK+GA + A E
Sbjct: 39 EMLKDEVRTTTYRNSI------YHNSHLFKDKVVMDVGSGTGILSMFAAKAGAKKVFAME 92
Query: 330 AFQPMAECCLRILECNGVADKVTVIPKRSTELTVGENGDMKQKANILVTEXFDTELIGEG 509
F MA +I+ N + V VI + + V E +K +I+++E L E
Sbjct: 93 -FSNMALTSRKIIADNNLDHIVEVIQAKVED--VHELPGGIEKVDIIISEWMGYCLFYES 149
Query: 510 ALSTFSHAHKFLLQQXAIXVPDSXVIYAQVVE 605
L+T A L + PD +Y +E
Sbjct: 150 MLNTVLVARDRWLAPNGMLFPDKARLYVCAIE 181
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 123 YHQEIARSAFADMLHDTE-RNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAK 299
Y+ E + +A H T +++ +AL+L +GK +LDIG GTG+ S +
Sbjct: 17 YYNETEAAKYASNSHITAIQHEMAERALELLALP---EGKSGFLLDIGCGTGMSSEVILD 73
Query: 300 SGADTIVACEAFQPMAE 350
+G V + +PM E
Sbjct: 74 AG-HMFVGVDVSRPMLE 89
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 264 TGTGLLSIMAAKSGAD-TIVACEAFQPMAECCLRILECNGVADKVTVIPKRSTELTV 431
T L+ I+ + G D TI+ A +P E C+R L + +V V+P R T ++V
Sbjct: 263 TANNLVFIIVSLHGIDSTIIMLWAHKPYREFCMRALAKLKLPVRVRVLPTRPTTISV 319
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 448 ISPFSPTVSSVDLFGITVTLSATPLHSNILRQHSAIG*KASQATIVSAPDFAAIMERSPV 269
+SPFSP + + L P +++ + +A A +VSAP A + +PV
Sbjct: 520 LSPFSPLLPPSRAPNVMAMLQTPPTPTSVAPMFDIMTSRAPMAPVVSAPTAPAPLVPAPV 579
Query: 268 P 266
P
Sbjct: 580 P 580
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 448 ISPFSPTVSSVDLFGITVTLSATPLHSNILRQHSAIG*KASQATIVSAPDFAAIMERSPV 269
+SPFSP + + L P +++ + +A A +VSAP A + +PV
Sbjct: 519 LSPFSPLLPPSRAPNVMAMLQTPPTPTSVAPMFDIMTSRAPMAPVVSAPTAPAPLVPAPV 578
Query: 268 P 266
P
Sbjct: 579 P 579
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 237 KKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECC 356
K VLDIG G GL S + GA +V + Q M E C
Sbjct: 37 KDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIENC 76
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 231 DGKKANVLDIGTGTGLLSIMAAKSGADTIV 320
+GKK VL++G+GTG+ I A GAD I+
Sbjct: 53 EGKK--VLELGSGTGVGGIALAALGADVII 80
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 231 DGKKANVLDIGTGTGLLSIMAAKSGADTIV 320
+GKK VL++G+GTG+ I A GAD I+
Sbjct: 14 EGKK--VLELGSGTGVGGIALAALGADVII 41
>AF016420-6|AAB65311.3| 530|Caenorhabditis elegans
Udp-glucuronosyltransferase protein7 protein.
Length = 530
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -2
Query: 316 IVSAPDFAAIMERSPVPVPISKTLAFFPSLCIXSIASF------KALLYFWFLSVSCSIS 155
+V +FAA ++ P P S+ L FF + +A+ AL +W V CS+
Sbjct: 465 LVKHAEFAAEFKKLPELDPYSRHLNFFQFFFLDIVATLLILFMLSALFVYWITYVICSVR 524
Query: 154 AKADL 140
+K+ +
Sbjct: 525 SKSKM 529
>U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 2 protein.
Length = 465
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 106 KMKTTIITKRSPDQPSLICCMILRGTKNIARL*NWLLXKCTMMERKPMSWI 258
K K +IT+ P+LI C+ G KN+ + ++L C M + P + I
Sbjct: 301 KWKRVLITRAVAITPTLILCIKAHGIKNLTGMNDFL--NCVQMVQLPFALI 349
>Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical
protein Y57G11C.11a protein.
Length = 268
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 249 VLDIGTGTGLLSIMAAKSGAD 311
++D+G+G GLLSI A+SG D
Sbjct: 79 LVDVGSGGGLLSIPLARSGFD 99
>U97008-7|AAB52313.1| 385|Caenorhabditis elegans Temporarily
assigned gene nameprotein 293 protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 467 NVSFLFHISIFTNSQFCRSFWDNSYLISHTIAFQYPETAFS 345
N F++ + IFT S R L+S +AF PE+AF+
Sbjct: 115 NDKFIYTVIIFTQSSSLRLSDMFGLLVSCILAFTVPESAFA 155
>Z66522-2|CAA91407.1| 408|Caenorhabditis elegans Hypothetical
protein F14E5.4 protein.
Length = 408
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 153 RRLIWRSLGDNRCLHLAYPTQYSLLED 73
R++ WRS+ NRCL A ++ ED
Sbjct: 91 RQMYWRSVNKNRCLSSASTVGAAMFED 117
>AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm
receptor protein 68 protein.
Length = 337
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 440 IFTNSQFCRSFWDNSYLISHTIAF 369
+FT QFC +F NS+LI T+ +
Sbjct: 9 VFTKIQFCATFLINSFLILLTLCY 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,097,326
Number of Sequences: 27780
Number of extensions: 282396
Number of successful extensions: 820
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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