Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O24
(557 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 135 3e-32
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 133 1e-31
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 133 1e-31
06_02_0351 + 15067596-15067771,15067999-15068076,15069166-15069385 31 0.47
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.82
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 30 1.4
05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253,297... 29 1.9
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 29 2.5
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 28 4.4
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 7.7
06_03_1213 - 28463774-28464286 27 7.7
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 7.7
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 135 bits (326), Expect = 3e-32
Identities = 63/89 (70%), Positives = 71/89 (79%)
Frame = +2
Query: 275 NCGKDQFHIRMRLHPFHVIRINKMLSCAGADXLXTGMRGAFGKPXGTVARVRIGQPIMSV 454
N GKD FH+R+R+HPFHV+RINKMLSCAGAD L TGMRGAFGKP GT ARV IGQ ++SV
Sbjct: 79 NAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSV 138
Query: 455 RSTDRWKAQVIEALRRAKFKFPGRQKIYY 541
R + EALRRAKFKFPGRQKI +
Sbjct: 139 RCKESNAKHAEEALRRAKFKFPGRQKIIH 167
Score = 134 bits (324), Expect = 5e-32
Identities = 61/94 (64%), Positives = 69/94 (73%)
Frame = +1
Query: 40 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 219
MGRRPARCYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 220 SSXALEAGRICCNKYLAKXLRKGSVPYPHETSPF 321
SS ALEA RI CNKY+ K K + PF
Sbjct: 61 SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPF 94
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 133 bits (321), Expect = 1e-31
Identities = 70/121 (57%), Positives = 81/121 (66%), Gaps = 2/121 (1%)
Frame = +2
Query: 179 HCA--CTWCPTNMNS*AXRLWRQDVSAAISTSLXNCGKDQFHIRMRLHPFHVIRINKMLS 352
HC +W N+ S A R + ++ S GKD FH+R+R+HPFHV+RINKMLS
Sbjct: 44 HCVHLVSWEKENVTSEALEAARIACNKYMTKS---AGKDAFHLRVRVHPFHVLRINKMLS 100
Query: 353 CAGADXLXTGMRGAFGKPXGTVARVRIGQPIMSVRSTDRWKAQVIEALRRAKFKFPGRQK 532
CAGAD L TGMRGAFGKP GT ARV IGQ ++SVR EALRRAKFKFPGRQK
Sbjct: 101 CAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQK 160
Query: 533 I 535
I
Sbjct: 161 I 161
Score = 114 bits (274), Expect = 5e-26
Identities = 52/87 (59%), Positives = 61/87 (70%)
Frame = +1
Query: 61 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSXALEA 240
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++S ALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 241 GRICCNKYLAKXLRKGSVPYPHETSPF 321
RI CNKY+ K K + PF
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHPF 90
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 133 bits (321), Expect = 1e-31
Identities = 61/89 (68%), Positives = 71/89 (79%)
Frame = +2
Query: 275 NCGKDQFHIRMRLHPFHVIRINKMLSCAGADXLXTGMRGAFGKPXGTVARVRIGQPIMSV 454
+ GKD FH+R+ HP+HV+RINKMLSCAGAD L TGMRGAFGKP GT ARVRIGQ ++SV
Sbjct: 386 HAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSV 445
Query: 455 RSTDRWKAQVIEALRRAKFKFPGRQKIYY 541
R D A EALRRAKFKFPGRQ++ +
Sbjct: 446 RCRDANAAHAQEALRRAKFKFPGRQRVIF 474
Score = 130 bits (313), Expect = 1e-30
Identities = 57/78 (73%), Positives = 64/78 (82%)
Frame = +1
Query: 52 PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSXA 231
P RCYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SS A
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 232 LEAGRICCNKYLAKXLRK 285
LEA RI CNKY+AK K
Sbjct: 372 LEAARIACNKYMAKHAGK 389
>06_02_0351 + 15067596-15067771,15067999-15068076,15069166-15069385
Length = 157
Score = 31.5 bits (68), Expect = 0.47
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 556 MEXMLIVDLLTSGELELGTAQSLDDLCLPPVSRAHGH 446
ME L+ +LLT E+ L T + LCLPP++ H
Sbjct: 1 MEPTLVANLLTYWEVFLVTEFGMPTLCLPPIATYWSH 37
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 0.82
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 444 MGCPMRTRATVP*GLPNAPRIPVWSXSAPAH 352
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 29.9 bits (64), Expect = 1.4
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Frame = +1
Query: 85 PYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSXALEAGRICC--N 258
P P S G PD +++F R D P ++VS +Y+ SS +
Sbjct: 1053 PSPGSFSFGGDPDTFLQVFIWNGTRPVSRDGPWTGYMVSSQYQANSSDIFYFSIVNNEEK 1112
Query: 259 KYLAKXLRKGSVPYPHETSPFP-RYPHQ*NVIMRWS*XAPXWDA--WCVWQASXY 414
+Y+ + +GS PY + +Y Q RW+ + WD W W + Y
Sbjct: 1113 RYITFSVSEGS-PYTRYVITYAGKYQFQ-----RWNISSSAWDVAEWPRWDCNYY 1161
>05_01_0378 +
2970528-2971008,2971961-2972036,2972108-2972253,
2972300-2972817
Length = 406
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 343 NVIMRWS*XAPXWDAWCVWQASXYCSTCSHWT 438
NV+ RW P AWC + S + CS W+
Sbjct: 342 NVLGRWG-HGPVPGAWCSGRKSWFSDPCSQWS 372
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 163 TVDDFPLC-VHLVSDEYEQLSSXALEAGRICCNKYLAKXLR---KGSVP 297
T D P C +HL SD Y S ++AG+ C L K L +G VP
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVP 635
>01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -2
Query: 529 LTSGELELGTAQSLDDLCLPPVSRAHGHDGLSNANTCYSTXRLAKRTTHP 380
L+SGEL +G + D+ LPPV G G S+A S + +R P
Sbjct: 134 LSSGELLIGASSPYDEPPLPPVHSRRG-AGRSSAVPRLSAPDIGRRYYEP 182
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 278 SXLARYLLQQIRPASKAXELSCSYSSDTKCTHSGKSS 168
S +R+ ++ P+ ELSC ++T C H G S
Sbjct: 82 SGSSRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>06_03_1213 - 28463774-28464286
Length = 170
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 541 IVDLLTSGELELGTAQSLDDLCLPPVSRAHGHDGLSNAN 425
++D++ +G+L LG +L +P + A G DG+ A+
Sbjct: 88 LLDVMNAGQLGLGALGALLQSAVPALESAAGPDGVLGAD 126
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 181 VESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTG 65
+ S + + S GSW H D +++ DT+ CS+G
Sbjct: 758 MNSSNQQIGSPSEEDLGSWGH-HSDPSTVPDTILQCSSG 795
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,827,030
Number of Sequences: 37544
Number of extensions: 368127
Number of successful extensions: 1066
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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