Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O23
         (434 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   198   5e-53
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   2.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   6.2  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  198 bits (484), Expect = 5e-53
 Identities = 96/118 (81%), Positives = 105/118 (88%)
 Frame = +3

Query: 72  RTKTVKKAAXIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 251
           RTKT+KKA+ +IIEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHS
Sbjct: 5   RTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHS 64

Query: 252 QVRGISIKLXEXERERRDNYVPXVSALEHDIIEVDPDTNDMLXMLDFNNINGLQLTQP 425
           QVRGISIKL E ERERRDNYVP VSALE DIIEVDP+T +ML  LDFNNI  +QLT P
Sbjct: 65  QVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNP 121


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 339 DIIEVDPDTNDMLXMLDFNNINGL 410
           DI +VDPD +  L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 238 VSDTRKCEESLSNFXXRSVRGVTTMSXKCLLSNMTS 345
           +++TR C E++S F     R   T+  K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,094
Number of Sequences: 2352
Number of extensions: 5575
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)