BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_O21 (653 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0446 - 3371829-3372132,3374691-3375673 32 0.46 07_01_0447 - 3377666-3378673 31 0.80 02_05_0515 + 29689259-29689535,29689867-29690209,29690475-296907... 31 0.80 10_02_0089 - 5138048-5138561,5138864-5139105,5139712-5140079,514... 31 1.1 01_07_0033 - 40619145-40619658,40619761-40620002,40620178-406205... 27 9.9 >07_01_0446 - 3371829-3372132,3374691-3375673 Length = 428 Score = 31.9 bits (69), Expect = 0.46 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +1 Query: 130 GTVYLAGEAIECCISFCYTAQPEHRNSQSHSDTLXNLAWASAQ 258 G + LA E +SF Y PEHR +H D L W Q Sbjct: 105 GCLRLAAELPAVVLSFDYRLAPEHRLPAAHEDAAAALIWLRDQ 147 >07_01_0447 - 3377666-3378673 Length = 335 Score = 31.1 bits (67), Expect = 0.80 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +1 Query: 130 GTVYLAGEAIECCISFCYTAQPEHRNSQSHSDTLXNLAWASAQ 258 G + LAGE +S Y PEHR ++ D + L+W Q Sbjct: 104 GALRLAGELPAVVLSADYRLAPEHRLPAAYEDAVAVLSWLRGQ 146 >02_05_0515 + 29689259-29689535,29689867-29690209,29690475-29690746, 29691282-29691478,29691874-29692237,29692831-29692898 Length = 506 Score = 31.1 bits (67), Expect = 0.80 Identities = 20/65 (30%), Positives = 32/65 (49%) Frame = -1 Query: 206 FLCSG*AV*QKEIQHSIASPAKYTVPVVNLADSSIIVVKNGLFMLVNQNLYELFNSKYLS 27 F+C G V E + YTVP V + D+S+ + + F+ + LY +SK++ Sbjct: 294 FICDGSPVNTFEFLSPLFQSLDYTVPRVRM-DTSVALAISRFFVFMYTLLYPWLDSKWIP 352 Query: 26 QFLQL 12 Q L L Sbjct: 353 QPLLL 357 >10_02_0089 - 5138048-5138561,5138864-5139105,5139712-5140079, 5140862-5140943 Length = 401 Score = 30.7 bits (66), Expect = 1.1 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = -2 Query: 583 YWAYWQHXKRNSDHFNVRPH-FLCCYCYF 500 YW YW + +DHF V PH F C+ YF Sbjct: 123 YWPYWNRTE-GADHFFVVPHDFAACF-YF 149 >01_07_0033 - 40619145-40619658,40619761-40620002,40620178-40620566, 40621586-40621688 Length = 415 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%) Frame = -2 Query: 583 YWAYWQHXKRNSDHFNVRPH-FLCCYCY 503 +W YW +DHF V PH F C+ Y Sbjct: 137 HWPYWNRTD-GADHFFVVPHDFGACFHY 163 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,053,204 Number of Sequences: 37544 Number of extensions: 309554 Number of successful extensions: 656 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 648 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 656 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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