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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O21
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0446 - 3371829-3372132,3374691-3375673                           32   0.46 
07_01_0447 - 3377666-3378673                                           31   0.80 
02_05_0515 + 29689259-29689535,29689867-29690209,29690475-296907...    31   0.80 
10_02_0089 - 5138048-5138561,5138864-5139105,5139712-5140079,514...    31   1.1  
01_07_0033 - 40619145-40619658,40619761-40620002,40620178-406205...    27   9.9  

>07_01_0446 - 3371829-3372132,3374691-3375673
          Length = 428

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +1

Query: 130 GTVYLAGEAIECCISFCYTAQPEHRNSQSHSDTLXNLAWASAQ 258
           G + LA E     +SF Y   PEHR   +H D    L W   Q
Sbjct: 105 GCLRLAAELPAVVLSFDYRLAPEHRLPAAHEDAAAALIWLRDQ 147


>07_01_0447 - 3377666-3378673
          Length = 335

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 130 GTVYLAGEAIECCISFCYTAQPEHRNSQSHSDTLXNLAWASAQ 258
           G + LAGE     +S  Y   PEHR   ++ D +  L+W   Q
Sbjct: 104 GALRLAGELPAVVLSADYRLAPEHRLPAAYEDAVAVLSWLRGQ 146


>02_05_0515 +
           29689259-29689535,29689867-29690209,29690475-29690746,
           29691282-29691478,29691874-29692237,29692831-29692898
          Length = 506

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = -1

Query: 206 FLCSG*AV*QKEIQHSIASPAKYTVPVVNLADSSIIVVKNGLFMLVNQNLYELFNSKYLS 27
           F+C G  V   E    +     YTVP V + D+S+ +  +  F+ +   LY   +SK++ 
Sbjct: 294 FICDGSPVNTFEFLSPLFQSLDYTVPRVRM-DTSVALAISRFFVFMYTLLYPWLDSKWIP 352

Query: 26  QFLQL 12
           Q L L
Sbjct: 353 QPLLL 357


>10_02_0089 -
           5138048-5138561,5138864-5139105,5139712-5140079,
           5140862-5140943
          Length = 401

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 583 YWAYWQHXKRNSDHFNVRPH-FLCCYCYF 500
           YW YW   +  +DHF V PH F  C+ YF
Sbjct: 123 YWPYWNRTE-GADHFFVVPHDFAACF-YF 149


>01_07_0033 -
           40619145-40619658,40619761-40620002,40620178-40620566,
           40621586-40621688
          Length = 415

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 583 YWAYWQHXKRNSDHFNVRPH-FLCCYCY 503
           +W YW      +DHF V PH F  C+ Y
Sbjct: 137 HWPYWNRTD-GADHFFVVPHDFGACFHY 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,053,204
Number of Sequences: 37544
Number of extensions: 309554
Number of successful extensions: 656
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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