Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O21
         (653 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5301| Best HMM Match : No HMM Matches (HMM E-Value=.)              101   5e-22
SB_40157| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_19140| Best HMM Match : Cyclotide (HMM E-Value=2.8)                 29   4.4  

>SB_5301| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 281

 Score =  101 bits (242), Expect = 5e-22
 Identities = 45/113 (39%), Positives = 71/113 (62%)
 Frame = +2

Query: 263 IASIQRQGAQGDKTPILXKTTSLEVAACDVGDAVFHSKPKILFCDLTIPLGETKTFWYXE 442
           + S+ R     +   +   +TS  V+  + G  +  ++PKILFCDL +  GE+KTF Y E
Sbjct: 82  VKSMDRITENSNHELVSDSSTSFTVSKGEHGHCILSTQPKILFCDLELAPGESKTFLYTE 141

Query: 443 SLPIEAPPSYRGTSVKYSYKITIATQKVGSHIKMVRIPFXVLPISPIINMQDL 601
           ++P E PPSYRG +VKYSYK+T+ T +V S I+++R+P  +L +  +  +Q L
Sbjct: 142 TIPSEGPPSYRGQAVKYSYKLTLGTSRVQSQIRLIRLPLRILVVQGLSEIQHL 194



 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
 Frame = +1

Query: 100 MIELSAKLTTGTVYLAGEAIECCISFCY-----TAQPEHRNSQSH--------SDTLXNL 240
           MIE+ A  T G VY AGE++ C I F       T +    NS  H        +  +  L
Sbjct: 1   MIEVKASTTRGAVYFAGESVRCEIVFTNVGDQDTDESMELNSLDHAKDINKGRTSHIERL 60

Query: 241 AWASAQFHC 267
           AWASAQ HC
Sbjct: 61  AWASAQIHC 69


>SB_40157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 312

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 22/89 (24%), Positives = 41/89 (46%)
 Frame = +2

Query: 350 VGDAVFHSKPKILFCDLTIPLGETKTFWYXESLPIEAPPSYRGTSVKYSYKITIATQKVG 529
           +G + + S  K +  D T+ +G++        LP+    + R  S K S  I++    V 
Sbjct: 220 LGKSQYSSFLKDVIKDRTVTIGKSLKH---NKLPLFRKQASRNKS-KQSKTISLLQNNVA 275

Query: 530 SHIKMVRIPFXVLPISPIINMQDLAALCG 616
              ++ R     + I  ++N+Q L +LCG
Sbjct: 276 LFAQLYRSSMVTVEIKKLLNIQFLVSLCG 304


>SB_19140| Best HMM Match : Cyclotide (HMM E-Value=2.8)
          Length = 168

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 598 ILHIYYWAYWQHXKRNSDHFNVR 530
           ++H +Y     H ++N DH+N+R
Sbjct: 59  LIHCFYRPLITHSRKNDDHYNIR 81


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,340,954
Number of Sequences: 59808
Number of extensions: 386752
Number of successful extensions: 1610
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)