Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O21
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical p...    61   8e-10
Z69661-5|CAA93495.2|  346|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF078785-11|AAC27097.2|  294|Caenorhabditis elegans Hypothetical...    29   3.8  
AL023828-13|CAA19457.2|  419|Caenorhabditis elegans Hypothetical...    28   5.0  
Z83237-3|CAB05787.1|  460|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z83237-1|CAB05786.2|  423|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF106573-2|AAC78153.1|  229|Caenorhabditis elegans Regulator of ...    27   8.8  
AC024836-2|AAK39348.1|  229|Caenorhabditis elegans Regulator of ...    27   8.8  

>Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical
           protein M01F1.9 protein.
          Length = 366

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +2

Query: 362 VFHSKPKILFCDLTIPLGETKTFWYXESLPIEA-PPSYRGTSVKYSYKITIATQKVGSHI 538
           V+ S P ILFC+L +  G+TK F     L     PP++RG  VKYS +IT+A   V  HI
Sbjct: 80  VYSSHPNILFCELQLGPGQTKQFVCDIPLSRNGIPPTFRGHLVKYSNRITVAVSHVQEHI 139

Query: 539 KMVRIPFXVLP 571
           K   +P  ++P
Sbjct: 140 KSAHLPIRIIP 150


>Z69661-5|CAA93495.2|  346|Caenorhabditis elegans Hypothetical
           protein F48F7.7 protein.
          Length = 346

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 404 IPLGETKTFWYXESLPIEAPPSYRGTSVKYSYKITIATQKVGSHIKMVRIPFXVLP 571
           +P G    F +   LPIE PPS+ G      Y + +   +     K  R  F V+P
Sbjct: 99  LPSGH-HVFPFAFPLPIECPPSFEGFHGHVRYSVRVELDRPWKFNKNEREDFKVIP 153


>AF078785-11|AAC27097.2|  294|Caenorhabditis elegans Hypothetical
           protein C04E12.12 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 443 SLPIEAPPSYRGTSVKYSYKITIATQKVGSHIKMVRIPFXVLPISPIINM 592
           +LPI  PPS+ G   KY Y     T +V    +M +     + +SP+I++
Sbjct: 112 NLPINVPPSFEG---KYGYLRYSVTAEVDRPWRMDKDKKRCITVSPLIDL 158


>AL023828-13|CAA19457.2|  419|Caenorhabditis elegans Hypothetical
           protein Y17G7B.11 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +2

Query: 404 IPLGETKTFWYXESLPIEAPPSYRGTSVKYSYKITIATQKVGSHIKMVRIPFXVLPI 574
           +P G T  F +  +LPI   PS+ G      Y + +   +     K  R  F V+P+
Sbjct: 97  LPAG-TNVFPFAFNLPINCAPSFEGCHGHIRYDVHVELDRPWKFNKKSRKCFSVIPV 152


>Z83237-3|CAB05787.1|  460|Caenorhabditis elegans Hypothetical
           protein R06B9.3 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 443 SLPIEAPPSYRGTSVKYSYKITIATQKVGSHIKMVRIPFXVLPISPIINM 592
           +LP+  PPS+ G   KY Y     T +V    ++ +     + +SP+I++
Sbjct: 112 NLPLNVPPSFEG---KYGYLRYSVTAEVDRPWRLDKAKKRCITVSPLIDL 158


>Z83237-1|CAB05786.2|  423|Caenorhabditis elegans Hypothetical
           protein R06B9.1 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 443 SLPIEAPPSYRGTSVKYSYKITIATQKVGSHIKMVRIPFXVLPISPIINM 592
           +LP+  PPS+ G   KY Y     T +V    ++ +     + +SP+I++
Sbjct: 112 TLPLNVPPSFEG---KYGYLRYSVTAEVDRPWRLDKAKRRCITVSPLIDL 158


>AF106573-2|AAC78153.1|  229|Caenorhabditis elegans Regulator of g
           protein signalingprotein 8.1 protein.
          Length = 229

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 304 PNIXENNFFGSSSL*CWRRSVP 369
           P I   +FF SS + CW R  P
Sbjct: 14  PQITNQDFFHSSGIECWNRQFP 35


>AC024836-2|AAK39348.1|  229|Caenorhabditis elegans Regulator of g
           protein signalingprotein 8.2 protein.
          Length = 229

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 304 PNIXENNFFGSSSL*CWRRSVP 369
           P I   +FF SS + CW R  P
Sbjct: 14  PQITNQDFFHSSGIECWNRQFP 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,679,919
Number of Sequences: 27780
Number of extensions: 300669
Number of successful extensions: 672
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)