BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O19
(655 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside ... 24 3.7
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 23 8.4
AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione S-tran... 23 8.4
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 8.4
>AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside
phosphorylase protein.
Length = 353
Score = 24.2 bits (50), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 441 ENSVKSTSSV-YSNGHSDRS*HGHIHGALR 527
+N ST+ V ++NGH + +GH +G R
Sbjct: 8 QNGKASTNGVPHANGHHQQHQNGHSNGVAR 37
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 23.0 bits (47), Expect = 8.4
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -2
Query: 543 YNANSTAK--RHGYGHVSFCHCVHW 475
Y+ +T K +HG GHV C W
Sbjct: 95 YHPKNTIKTLKHGGGHVMVWGCFSW 119
>AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione
S-transferase D12 protein.
Length = 211
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 344 LTVKDLHITISYCCLDI 394
LT+ D I +S+C LD+
Sbjct: 150 LTIADFSIFVSFCSLDM 166
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.0 bits (47), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 394 IDFTAEEVDLTSPLTKKILLKAPLVSTPMDTVTE 495
+D A E DLTS + K A +VST M + +
Sbjct: 585 VDPLAREDDLTSLIDSKFESGAGIVSTTMTKMAD 618
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,954
Number of Sequences: 2352
Number of extensions: 11942
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -