Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O19
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039052-7|AAO91672.2|  462|Caenorhabditis elegans Hypothetical ...   122   3e-28
AF039052-6|AAF98635.2|  534|Caenorhabditis elegans Hypothetical ...   122   3e-28
Z48585-3|CAA88485.1|  322|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>AF039052-7|AAO91672.2|  462|Caenorhabditis elegans Hypothetical
           protein T22D1.3b protein.
          Length = 462

 Score =  122 bits (293), Expect = 3e-28
 Identities = 60/121 (49%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +1

Query: 289 SLKTEGDLRXGLSAEDTFANSEGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLV 468
           SL+ +  L  G +  +  A+  GLTYNDF +LPG+I+F   +V L + +TK + +KAPLV
Sbjct: 9   SLELDNSLTDGETVHEMMAHKAGLTYNDFNILPGFINFGVHDVSLETNITKDLKIKAPLV 68

Query: 469 STPMDTVTEADMAISMALCGGIGIIHHNC-TPEYQANEXHKVXKYKHGFIXDPVCMGPEN 645
           S+PMDTVTE+ MAI MAL GGIGIIH N   PE QA E  KV ++K G++  P C+  ++
Sbjct: 69  SSPMDTVTESGMAIVMALYGGIGIIHGNFPKPEDQAAEVLKVKRFKQGYVMQPHCLSRDS 128

Query: 646 T 648
           T
Sbjct: 129 T 129


>AF039052-6|AAF98635.2|  534|Caenorhabditis elegans Hypothetical
           protein T22D1.3a protein.
          Length = 534

 Score =  122 bits (293), Expect = 3e-28
 Identities = 60/121 (49%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +1

Query: 289 SLKTEGDLRXGLSAEDTFANSEGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLV 468
           SL+ +  L  G +  +  A+  GLTYNDF +LPG+I+F   +V L + +TK + +KAPLV
Sbjct: 9   SLELDNSLTDGETVHEMMAHKAGLTYNDFNILPGFINFGVHDVSLETNITKDLKIKAPLV 68

Query: 469 STPMDTVTEADMAISMALCGGIGIIHHNC-TPEYQANEXHKVXKYKHGFIXDPVCMGPEN 645
           S+PMDTVTE+ MAI MAL GGIGIIH N   PE QA E  KV ++K G++  P C+  ++
Sbjct: 69  SSPMDTVTESGMAIVMALYGGIGIIHGNFPKPEDQAAEVLKVKRFKQGYVMQPHCLSRDS 128

Query: 646 T 648
           T
Sbjct: 129 T 129


>Z48585-3|CAA88485.1|  322|Caenorhabditis elegans Hypothetical
           protein ZK673.3 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = +1

Query: 331 EDTFANSEGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLVSTPMDTVTEADMAI 510
           E T  N+  +  + FL    Y++ TA  +     + K++LLK+P+        TE+D A+
Sbjct: 25  EKTGQNATIVNMDSFLEFFAYLNPTAP-IPTVPEIEKQLLLKSPIRCIVCGMETESDSAV 83

Query: 511 SMAL 522
           ++++
Sbjct: 84  TLSI 87


>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 277 TKKMSLKTEGDLRXGLSAEDTFANSEGLTYNDFLLLPGY-IDFTAEEVDLTSPLTKKI 447
           TKK+  K++  L   L     F    GLT    +LL GY +D T+ E    S LT+ I
Sbjct: 522 TKKVFWKSKDSLINALKKGSRFVAEAGLTQLPLVLLNGYPLDVTSIE-RFESSLTQNI 578


>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 277 TKKMSLKTEGDLRXGLSAEDTFANSEGLTYNDFLLLPGY-IDFTAEEVDLTSPLTKKI 447
           TKK+  K++  L   L     F    GLT    +LL GY +D T+ E    S LT+ I
Sbjct: 522 TKKVFWKSKDSLINALKKGSRFVAEAGLTQLPLVLLNGYPLDVTSIE-RFESSLTQNI 578


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,333,634
Number of Sequences: 27780
Number of extensions: 249704
Number of successful extensions: 642
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)