Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O15
(610 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 201 9e-51
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 187 2e-46
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 178 1e-43
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 152 7e-36
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 143 3e-33
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 128 8e-29
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 128 1e-28
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 126 4e-28
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 89 1e-16
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 83 5e-15
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 76 8e-13
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 61 2e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 58 1e-07
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 55 2e-06
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 54 3e-06
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 54 4e-06
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 44 0.004
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 43 0.007
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 36 0.99
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 35 1.3
UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 34 3.0
UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 7.0
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q045G9 Cluster: Succinate dehydrogenase/fumarate reduct... 32 9.3
UniRef50_Q5JNK3 Cluster: Putative uncharacterized protein P0638D... 32 9.3
UniRef50_A4RSV1 Cluster: SnoRNA-binding nucleolar protein, putat... 32 9.3
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.3
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 32 9.3
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 201 bits (491), Expect = 9e-51
Identities = 97/154 (62%), Positives = 110/154 (71%)
Frame = +1
Query: 70 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 249
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 250 TRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA 429
TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEE 135
Query: 430 IINXKRSQKTARKYLARQRLAKVEGALXEQFHTG 531
I+N KRS+K +KY R++ AK+ L EQF G
Sbjct: 136 ILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 494 RLRVLXKSNSTQGRLLACVASRPGQCGRADGYILXGKEL 610
++ L + QG+LLAC+ASRPGQCGRADGY+L GKEL
Sbjct: 157 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKEL 195
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 158
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 23 MGISRDHWHKRRATG 67
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 187 bits (456), Expect = 2e-46
Identities = 89/134 (66%), Positives = 99/134 (73%)
Frame = +1
Query: 70 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 249
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 250 TRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA 429
TRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEE 135
Query: 430 IINXKRSQKTARKY 471
I+N KRS+K +KY
Sbjct: 136 ILNKKRSKKIQKKY 149
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 158
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 23 MGISRDHWHKRRATG 67
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 178 bits (433), Expect = 1e-43
Identities = 84/125 (67%), Positives = 100/125 (80%), Gaps = 2/125 (1%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 342
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DA
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDA 106
Query: 343 TPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINXKRSQKTARKYLARQRLAKVEGALXE 516
TPFRQWYE+HY LPLGRK+ K + E+ ++ KRS+K +KYL RQ+ KVE AL +
Sbjct: 107 TPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALED 166
Query: 517 QFHTG 531
QF +G
Sbjct: 167 QFTSG 171
Score = 57.6 bits (133), Expect = 2e-07
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +2
Query: 524 TQGRLLACVASRPGQCGRADGYILXGKEL 610
T GR+LAC++SRPGQCGR+DGYIL GKEL
Sbjct: 169 TSGRILACISSRPGQCGRSDGYILEGKEL 197
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIH 155
GKR +RKKRK+ELGRPAANT+LG R+H
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVH 44
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 152 bits (368), Expect = 7e-36
Identities = 77/118 (65%), Positives = 88/118 (74%)
Frame = +1
Query: 178 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 357
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 358 WYESHYTLPLGRKKGAKLTEAEEAIINXKRSQKTARKYLARQRLAKVEGALXEQFHTG 531
WYESHY LPLGRKKGAKLT EE I+N KRS+K +KY R++ AK+ L EQF G
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 494 RLRVLXKSNSTQGRLLACVASRPGQCGRADGYILXGKEL 610
++ L + QG+LLAC+ASRPGQCGRADGY+L GKEL
Sbjct: 137 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKEL 175
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 158
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 23 MGISRDHWHKRRATG 67
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 143 bits (347), Expect = 3e-33
Identities = 77/146 (52%), Positives = 94/146 (64%), Gaps = 8/146 (5%)
Frame = +1
Query: 118 PLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 297
P T S+ R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELV
Sbjct: 33 PANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELV 92
Query: 298 RTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINXKRSQ 453
RT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E A K+S
Sbjct: 93 RTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSN 152
Query: 454 KTARKYLARQRLAKVEGALXEQFHTG 531
RK R+ ++ + EQF +G
Sbjct: 153 HVTRKLEKRKEGRTLDPHIEEQFGSG 178
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +2
Query: 530 GRLLACVASRPGQCGRADGYILXGKEL 610
GRLLAC++SRPGQCGRADGYIL GKEL
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKEL 204
Score = 35.9 bits (79), Expect = 0.75
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQR 149
GK+ RKKRKYELGR ANT+L +
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNK 42
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 128 bits (310), Expect = 8e-29
Identities = 61/103 (59%), Positives = 76/103 (73%)
Frame = +1
Query: 118 PLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 297
P T S+ R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELV
Sbjct: 130 PANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELV 189
Query: 298 RTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 426
RT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 190 RTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 128 bits (309), Expect = 1e-28
Identities = 57/77 (74%), Positives = 68/77 (88%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 342
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDP 106
Query: 343 TPFRQWYESHYTLPLGR 393
TPF+ W+++HY L LG+
Sbjct: 107 TPFKLWFKTHYGLELGK 123
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +2
Query: 524 TQGRLLACVASRPGQCGRADGYILXGKEL 610
+ GRLLAC++SRPGQCGR DGY+L G+EL
Sbjct: 147 SSGRLLACISSRPGQCGRCDGYVLEGEEL 175
Score = 39.5 bits (88), Expect = 0.061
Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = +3
Query: 69 GKRAPI-RKKRKYELGRPAANTRLGPQRI 152
G R P+ +KKRKYELGRP++NT+LG + +
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLV 43
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 126 bits (304), Expect = 4e-28
Identities = 68/140 (48%), Positives = 88/140 (62%), Gaps = 14/140 (10%)
Frame = +1
Query: 154 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 333
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVA 103
Query: 334 VDATPFRQWYESHYTLPL------------GRKKGAKLTE--AEEAIINXKRSQKTARKY 471
VDA PF++WY HY + L KKG K A++ +N K S K R++
Sbjct: 104 VDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVN-KASPKLQREW 162
Query: 472 LARQRLAKVEGALXEQFHTG 531
R+R +VE A+ +Q G
Sbjct: 163 TRRRRNHRVEKAIADQLREG 182
Score = 41.5 bits (93), Expect = 0.015
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 527 QGRLLACVASRPGQCGRADGYILXGKEL 610
+GR+LA + SRPGQ GRADG +L G EL
Sbjct: 181 EGRVLARITSRPGQSGRADGILLEGAEL 208
Score = 32.7 bits (71), Expect = 7.0
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRI 152
GK RK+ K ELGR ANTRLG +R+
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRV 43
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 88.6 bits (210), Expect = 1e-16
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 342
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDP 106
Query: 343 TPFRQWYESHY 375
PFR W+ Y
Sbjct: 107 APFRLWFLKFY 117
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 530 GRLLACVASRPGQCGRADGYILXGKEL 610
GR+LAC++SRPGQ G +GYIL GKEL
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKEL 225
Score = 35.9 bits (79), Expect = 0.75
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIH 155
GK+ ++KK+K +GR ANTRLG R+H
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVH 44
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 83.0 bits (196), Expect = 5e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 342
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V +D+
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDS 115
Query: 343 TPFR 354
PF+
Sbjct: 116 APFK 119
Score = 38.7 bits (86), Expect = 0.11
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 536 LLACVASRPGQCGRADGYILXGKEL 610
+LA ++SRPGQ G ADGYIL G EL
Sbjct: 140 ILARISSRPGQVGTADGYILEGPEL 164
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 154 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 333
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL K+++V
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVK 103
Query: 334 VDATPFR 354
+ A PF+
Sbjct: 104 ISAEPFK 110
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVD 339
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLD 105
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 530 GRLLACVASRPGQCGRADGYILXGKEL 610
G++LA + SRPGQ GRADGYIL G+EL
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQEL 168
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 342
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+ +D+
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDS 100
Query: 343 TPF 351
PF
Sbjct: 101 MPF 103
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 54.8 bits (126), Expect = 2e-06
Identities = 42/133 (31%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Frame = +2
Query: 215 TSLGDRNVQLAKPVSLMLCIMHLTMNWCVQRPLSRXXXXXXXXXHSGSGMSRIIXXXXXX 394
TS G N +P S M M TM+W R SR SGM I+
Sbjct: 4 TSHGALNAAPERPGSSMWSTMPPTMSWLEPRHWSRTVSSLLTACLLDSGMRPIMPLLLGA 63
Query: 395 XXXXXXXX-XXXXXSTXREVKRQQENTWQGNVLLRLRVLXKSNSTQGRLLACVASRPGQC 571
+ K+ Q+ + AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 572 GRADGYILXGKEL 610
GRADGYIL GKEL
Sbjct: 124 GRADGYILEGKEL 136
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 54.0 bits (124), Expect = 3e-06
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = +1
Query: 316 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINXKRSQKTARKYL 474
K+AIV + PFRQW+E+ Y LG KKG +T EE + KRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 475 ARQRL--AKVEGALXEQFHTGXFAGLRGESPRSV 570
RQ L A VE +L E+F TG P V
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQV 94
Score = 50.8 bits (116), Expect = 2e-05
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 512 KSNSTQGRLLACVASRPGQCGRADGYILXGKEL 610
K GRLLAC++S+PGQ GRADGY+ GKEL
Sbjct: 75 KEEFVTGRLLACISSKPGQVGRADGYLFEGKEL 107
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 267
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 530 GRLLACVASRPGQCGRADGYILXGKEL 610
GRL A V+SRPGQ GR DGYIL G+EL
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEEL 132
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 72 KRAPIRKKRKYELGRPAANTRLGPQRIH 155
KR+ RKKR +E GR ANTR+GP+RIH
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIH 44
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 43.6 bits (98), Expect = 0.004
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +1
Query: 289 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINXKRSQKTARK 468
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ ++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 469 YLARQRLAKVEGALXEQFHTG 531
RQ+ K++ + EQF +G
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSG 99
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 330
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L K AI+
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 35.5 bits (78), Expect = 0.99
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +1
Query: 229 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 393
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 394 KKGAKLTEAEEAI 432
G L A+E I
Sbjct: 234 MSGDLLNYAQELI 246
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 60 PPAGKRAPIRKKRKYELGRPAANTRLGPQR 149
P G+ P RKKRK+E+G P T +G +R
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEER 41
>UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 316
Score = 34.3 bits (75), Expect = 2.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 33 VGITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSXSF-TWWKY 182
+G+TG G PA ++ ++K++ + P T L P+ +S SF T W +
Sbjct: 10 MGLTGSLAGTPAPEKKQVKKRKSWGQQLPEPKTNLPPRYFNSSSFITQWHW 60
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 60 PPAGKRAPIRKKRKYELGRPAANTRLGPQRI 152
P GK P KR+YELGR TRLG + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDREL 42
Score = 33.9 bits (74), Expect = 3.0
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 330
RS GGN+K+ LR D N + +TRK +I V N+++ V+ + + ++
Sbjct: 46 RSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1;
uncultured euryarchaeote Alv-FOS1|Rep: Putative
uncharacterized protein - uncultured euryarchaeote
Alv-FOS1
Length = 484
Score = 33.1 bits (72), Expect = 5.3
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +1
Query: 133 GSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 312
GS L + ++ G + + L N +W + R + + V N + N R T+
Sbjct: 221 GSKLLVNATVKNMGTSPGWANLTFSIDNHTWSNNIYVRSEKTVHVALNVTRNGTFRLTTV 280
Query: 313 VKNAI 327
VKN I
Sbjct: 281 VKNDI 285
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 7.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 325 IVVVDATPFRQWYESHYTLPLGRKK 399
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 7.0
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 340 ATPFRQWYESHYTLPLGRKKGAKLTEAE 423
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_Q045G9 Cluster: Succinate dehydrogenase/fumarate
reductase, flavoprotein subunit; n=1; Lactobacillus
gasseri ATCC 33323|Rep: Succinate dehydrogenase/fumarate
reductase, flavoprotein subunit - Lactobacillus gasseri
(strain ATCC 33323 / DSM 20243)
Length = 597
Score = 32.3 bits (70), Expect = 9.3
Identities = 26/96 (27%), Positives = 39/96 (40%)
Frame = +1
Query: 142 LSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKN 321
L ++ P S GGNT+Y G F+WGS K Y +E T +KN
Sbjct: 40 LIDAAPEGSEGGNTRYAG-----GAFAWGSNFDQLKEYYKQTYYPFEYDE-EALDTFIKN 93
Query: 322 AIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA 429
V+ + + Y P GR+ + E ++A
Sbjct: 94 ---VMQMKEYSKKYFGIEAQPTGRRPNGEYPEYKDA 126
>UniRef50_Q5JNK3 Cluster: Putative uncharacterized protein
P0638D12.35; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0638D12.35 - Oryza sativa subsp. japonica (Rice)
Length = 367
Score = 32.3 bits (70), Expect = 9.3
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GSLA*AKGHRLGNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRL-DTG 213
G++ A G+R+ P R GSMS G + GS++S S RG + + A G
Sbjct: 117 GTIGAAAGNRMRGFVPPGRGGSMSNGAGVVGHGSSMSHSAGVSGRGSSMSHGATGYGGFG 176
Query: 214 NFSWGSECSTRKT 252
W + S+ T
Sbjct: 177 GGGWDAGTSSAPT 189
>UniRef50_A4RSV1 Cluster: SnoRNA-binding nucleolar protein, putative;
n=1; Ostreococcus lucimarinus CCE9901|Rep: SnoRNA-binding
nucleolar protein, putative - Ostreococcus lucimarinus
CCE9901
Length = 2488
Score = 32.3 bits (70), Expect = 9.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 77 CAHTQEEEV*VRASRCKHQARPSANPLRFVHVVEILSTV--RCVWTPVTSL 223
C Q EEV V + C Q+ A +R +H E+LS+V R WT V L
Sbjct: 1497 CLCDQNEEVDVFLNLCHIQSHRRARAIRQLHAPEVLSSVEPRLYWTYVIPL 1547
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 9.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 293 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 204
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 32.3 bits (70), Expect = 9.3
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 60 PPAGKRAPIRKKRKYELGRPAANTRLGPQ 146
P G+ RKKRK ELGR +NTR+ Q
Sbjct: 12 PSGGRIVLARKKRKRELGREPSNTRVAEQ 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,160,988
Number of Sequences: 1657284
Number of extensions: 11720211
Number of successful extensions: 33641
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33626
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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