Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O15
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 131 9e-32
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 130 2e-31
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 28 0.93
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 27 1.6
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 26 3.7
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 26 5.0
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 5.0
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 6.5
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 6.5
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 8.7
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 131 bits (316), Expect = 9e-32
Identities = 69/133 (51%), Positives = 85/133 (63%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 342
R RGGN K+RALRLD+GNFSWGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA
Sbjct: 47 RVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDA 106
Query: 343 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINXKRSQKTARKYLARQRLAKVEGALXEQF 522
PFR WYE+HY + +G KG K T +S+ RK+ AR +KV+ AL QF
Sbjct: 107 APFRVWYETHYGILMG-SKGKKATSTPN-----PKSKHVQRKHSARLGDSKVDSALETQF 160
Query: 523 HTGXFAGLRGESP 561
G + P
Sbjct: 161 AAGRLYAVVSSRP 173
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 72 KRAPIRKKRKYELGRPAANTRLGPQRIH 155
KRA RKKRK+ELGR +NTR+GP+RIH
Sbjct: 17 KRAQYRKKRKFELGRQPSNTRIGPKRIH 44
Score = 44.8 bits (101), Expect = 1e-05
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 530 GRLLACVASRPGQCGRADGYILXGKEL 610
GRL A V+SRPGQ GR DGYIL G+EL
Sbjct: 163 GRLYAVVSSRPGQSGRCDGYILEGEEL 189
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 23 MGISRDHWHKRRATG 67
MGI+RD HKR ATG
Sbjct: 1 MGITRDSRHKRSATG 15
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 130 bits (314), Expect = 2e-31
Identities = 69/133 (51%), Positives = 85/133 (63%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 342
R RGGN K+RALRLD+GNFSWGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA
Sbjct: 47 RVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDA 106
Query: 343 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINXKRSQKTARKYLARQRLAKVEGALXEQF 522
PFR WYE+HY + +G KG K T +S+ RK+ AR +KV+ AL QF
Sbjct: 107 APFRVWYETHYGILMG-SKGKKATATP-----TPKSKHVQRKHSARLGDSKVDSALETQF 160
Query: 523 HTGXFAGLRGESP 561
G + P
Sbjct: 161 AAGRLYAVVSSRP 173
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 72 KRAPIRKKRKYELGRPAANTRLGPQRIH 155
KRA RKKRK+ELGR +NTR+GP+RIH
Sbjct: 17 KRAQYRKKRKFELGRQPSNTRIGPKRIH 44
Score = 44.8 bits (101), Expect = 1e-05
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 530 GRLLACVASRPGQCGRADGYILXGKEL 610
GRL A V+SRPGQ GR DGYIL G+EL
Sbjct: 163 GRLYAVVSSRPGQSGRCDGYILEGEEL 189
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 23 MGISRDHWHKRRATG 67
MGI+RD HKR ATG
Sbjct: 1 MGITRDSRHKRSATG 15
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 28.3 bits (60), Expect = 0.93
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 115 VPLQTPGSALSES--TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNN 288
+ + P S L + +P +R T R+L +G S S ++ +TR V +AS+N
Sbjct: 522 INIDIPPSPLQNTVISPQPTRRSRTPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSN 578
Query: 289 ELVRTKTLVKNAIVVVDATPFRQWYE 366
L+ + ++ V TPF +E
Sbjct: 579 SLISIISSKPSSSTVQRQTPFHSPFE 604
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 457 TARKYLARQRLAKVEGALXEQFHTGXFAGLRGESPRSVWSR 579
T RKYL + A +EGA +Q + A +R ES +VWSR
Sbjct: 431 TCRKYLPKMHDANLEGANIDQ--SVLMASVR-ESLPAVWSR 468
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 223 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRK 396
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 397 K 399
+
Sbjct: 310 Q 310
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 5.0
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 589 VTIGATTLTWATRHASQQTXLC 524
+T+G T+L+W+ RH+ + C
Sbjct: 329 LTLGGTSLSWSWRHSGRIVSAC 350
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 362 YHCLNGVASTTTIAFLTRVFVRTNS 288
++C N V S T + + VFVR NS
Sbjct: 518 FYCSNEVLSLTALLSVPNVFVRPNS 542
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 284 LDALYTTSMIRVLRVEHSDPQEKLPVSRR 198
L+ + T S +V R H DP KLP RR
Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 208 CPDAAHGT*YF--HHVNEXEWIR*GPSLVFAAGRPNSYFLFLRMGARFP 68
CPD + G Y V + ++R PS+++A ++ LF+R+ ++P
Sbjct: 307 CPDPSQGFNYCIREAVFQGYFVRPLPSIIWALFEFSAVALFIRLKMKYP 355
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 181 TKYRALRLDTGNFSWGSECSTRKTRI 258
T YRA+ LDTG+ E + K RI
Sbjct: 1133 TVYRAVNLDTGDLMAVKEVALHKPRI 1158
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,407,471
Number of Sequences: 5004
Number of extensions: 45570
Number of successful extensions: 120
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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