Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O12
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.89 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -1

Query: 288 IFELIWNLMTSVCAAADIHSSWY 220
           +F ++WN   +  A+ D  + WY
Sbjct: 284 LFTILWNCQNTRVASEDFKAIWY 306


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 405 RXEKXSSRYSKTYGTMRSH 461
           R +  + RY +T GTM SH
Sbjct: 227 RFQIATGRYDETRGTMLSH 245


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 279 AQRYSYKCESEVLPHGRIFFPP 344
           A+R +Y CE  +  HG+  + P
Sbjct: 59  AKRAAYDCEGVIRHHGQWNYSP 80


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +3

Query: 282 QRYSYKCESE 311
           QRY++KCE++
Sbjct: 42  QRYTWKCENQ 51


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 139 DAAWWLIMLSTTIGL 95
           D   WLI+LS  +GL
Sbjct: 8   DTVSWLILLSLLLGL 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,763
Number of Sequences: 336
Number of extensions: 2865
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)