Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O12
(618 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0) 101 6e-22
SB_39930| Best HMM Match : Keratin_B2 (HMM E-Value=0.25) 34 0.11
SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08) 34 0.11
SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26) 32 0.32
SB_47331| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4) 31 0.99
SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0) 30 1.3
SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0) 30 1.3
SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_16503| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 27 9.2
SB_3223| Best HMM Match : Ion_trans (HMM E-Value=0) 27 9.2
>SB_42530| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=0)
Length = 520
Score = 101 bits (241), Expect = 6e-22
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 4/114 (3%)
Frame = +1
Query: 289 IPTSANPKFFHMVEYFFHRACQVVEDKLVE--DLKSRTP--IEXKKXKVAGILKLMEPCD 456
+ + P F M FF +A VE +L+ D + P E KK ++ GIL +M+PC
Sbjct: 38 VESDTEPSFTEMCAGFFDQARTYVEHRLLTRPDPPGKIPEKFEDKKHRIKGILDVMKPCQ 97
Query: 457 HILEIQFPLRRDSGDYEMILXYRAQHSTHRTPTKGGIRFSTDVTRDEVKALSAL 618
+L + FP++ D+G+Y+++ YRAQHS HR+P KGGIR+S DV DEV+AL+ L
Sbjct: 98 DVLSVVFPIKLDNGEYKLVQGYRAQHSHHRSPCKGGIRYSEDVDIDEVQALATL 151
>SB_39930| Best HMM Match : Keratin_B2 (HMM E-Value=0.25)
Length = 312
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 181 SVQNEALNTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSA 303
+V +A+NT ++ +N CCRT + I K +PT A
Sbjct: 251 TVPTKAINTCKTVLTKAINTCCRTVPTKAINTCCKTVPTKA 291
>SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 997
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 436 KLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRTPTKGGIRFSTDVTRDEVKAL 609
+++EP + +L + P D G+ ++ YR + ++ P KGG+RF V +K L
Sbjct: 379 RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFL 435
>SB_14929| Best HMM Match : ELFV_dehydrog_N (HMM E-Value=6.4e-08)
Length = 131
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 436 KLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRTPTKGGIRFSTDVTRDEVKAL 609
+++EP + +L + P D G+ ++ YR + ++ P KGG+RF V +K L
Sbjct: 71 RIVEP-ERVLSFRVPWLDDKGEVQVNRGYRVEFNSSIGPYKGGLRFHPSVNLGILKFL 127
>SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26)
Length = 889
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 616 KLITP*LHLWLRPLRIEYLLWLESCVWNVVRDSXISFRN--RQNRASEEIESQ 464
++I P WL L I LLW CV+ ++RDS ++ S EI+S+
Sbjct: 413 QVILPEFAYWLCLLTISLLLWQPLCVYTLLRDSHTMLKSPLASQLGSREIDSR 465
>SB_47331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 351 TGSVEKIFYHVEELRIRTCRNIFELIWNLMTSVCAAADIHSSWYDSEHCIEGF 193
TG+V +YH +L I + NI W VC D ++Y S++ I+ F
Sbjct: 203 TGAVYTDYYHDSDLTIGSVLNI----WGRKFQVCDCDDFTKAYYKSKYGIDSF 251
>SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4)
Length = 582
Score = 30.7 bits (66), Expect = 0.99
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +1
Query: 250 TYASHEIPDKLKDIPTSANPKFFHMVEYFFHR--ACQVVEDKLVEDLKSRTP-IEXKKXK 420
TY+ E+ D L++ +S FH+ + HR +++ + V+D K +TP +E KK
Sbjct: 334 TYSQSELMD-LRNNSSSLTD--FHI--FCLHRWLPANLLKPEAVKDAKKQTPDLEFKKW- 387
Query: 421 VAGILKLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRT 549
GIL I E+ PL+R+ + Y+AQ H T
Sbjct: 388 TKGILDHAGTVSAISEVIEPLKRNLTELFKAQDYQAQPLDHLT 430
>SB_43845| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
Length = 448
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 424 AGIL-KLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRTPTKGGIRFSTDVTRDEV 600
A IL +++EP + ++ + P R DS + + +R + ++ P KGG+RF V +
Sbjct: 47 ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 105
Query: 601 KAL 609
K L
Sbjct: 106 KFL 108
>SB_29491| Best HMM Match : ELFV_dehydrog (HMM E-Value=0)
Length = 486
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 424 AGIL-KLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRTPTKGGIRFSTDVTRDEV 600
A IL +++EP + ++ + P R DS + + +R + ++ P KGG+RF V +
Sbjct: 85 ANILDRIVEP-ERVVIFRVPWRDDSNNIRVNRGFRVEFNSTIGPYKGGLRFHPTVNLGIL 143
Query: 601 KAL 609
K L
Sbjct: 144 KFL 146
>SB_24841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 282 QRYSYKCESEVLPHGRIFFPPSLSSC 359
QR YK SE HGR FP SL C
Sbjct: 163 QRVGYKVSSEAHIHGRQSFPLSLDHC 188
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +1
Query: 172 LKNSVQNEALNTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRAC 351
+K N+ T+ I+P + RTY DK+ +IP+ F + E F
Sbjct: 194 MKRFGDNDLYTTLGYILPTHLLSMARTYEKRRKMDKVTEIPS-----FLALDELEFFEPF 248
Query: 352 QVV---EDKLVEDLKS 390
V+ +D V DLKS
Sbjct: 249 PVIDGNDDVFVHDLKS 264
>SB_16503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 139 DAAWWLIMLSTTIGLGIGSPYT 74
DA WW ++ TT+G G P T
Sbjct: 462 DAFWWAVVTMTTVGYGDMRPIT 483
>SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2065
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 617 KADNALTSSLVTSVENRIPPLVGVLCVECC 528
K DN +TSS V ++ + PLV + V CC
Sbjct: 1996 KDDNEMTSSGVEHAQSLVNPLVIGIAVLCC 2025
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 420 SSRYSKTYGTMRSHS*DSISSEARFWRLRNDIXLSRTTFHTQD---SNQRRYSILNGRNQ 590
SSR S+ + + +S D S E R R RN++ + ++ F ++ Q R L N+
Sbjct: 177 SSRTSRRHSISKRNSMDKHSEEYRQKRERNNVAVRKSRFKSKQKFIETQSRVEELTEENE 236
Query: 591 R 593
R
Sbjct: 237 R 237
>SB_3223| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 486
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 139 DAAWWLIMLSTTIGLGIGSPYT 74
DA WW ++ TT+G G P T
Sbjct: 368 DAFWWAVVTMTTVGYGDMYPVT 389
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,603,430
Number of Sequences: 59808
Number of extensions: 364720
Number of successful extensions: 777
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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