Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O12
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...   127   5e-30
U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm rec...    30   1.2  
Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score =  127 bits (307), Expect = 5e-30
 Identities = 60/122 (49%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
 Frame = +1

Query: 256 ASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEX-KKXKVAGI 432
           A  ++ D+ K +    NP F+ MV+++F++  +V+  KL E+LKS +  +  KK  V+GI
Sbjct: 24  AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83

Query: 433 LKLMEPCDHILEIQFPLRRDSGDYEMILXYRAQHSTHRTPTKGGIRFSTDVTRDEVKALS 612
           L  ++P + +L I FP+RRD+G++E+I  +RAQHS HRTPTKGGIR+S DV  DEVKALS
Sbjct: 84  LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCEDEVKALS 143

Query: 613 AL 618
           AL
Sbjct: 144 AL 145


>U28738-2|AAA68309.4|  982|Caenorhabditis elegans Hypothetical
           protein T28D9.7 protein.
          Length = 982

 Score = 30.7 bits (66), Expect = 0.87
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
 Frame = +1

Query: 175 KNSVQNEAL--NTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRA 348
           ++ V+ E L  N  F  +  G    C    S  I  + K     AN  FF + E  F+R 
Sbjct: 443 EDDVEQEELDENVSFSTVSGGETFSCED-KSRPITSEEK----KANQMFFLLDETAFNR- 496

Query: 349 CQVVEDKLVEDLKSR--TPIEXKKXKVAGILKLMEPCDHILEIQFPLRRDSGDY 504
                   V DLKSR    ++    ++A IL++ME   H+      +R  +GD+
Sbjct: 497 -NATRYMSVGDLKSRYGDKVDDVAEEIAVILRIMEKLWHVFMPDSYIRTMTGDF 549


>AF000299-10|AAC47986.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 162 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 543 VCGMLCAIA*YHFVIARIAPQRKLNLKNVIAWF 445
           +CG+L  +   HF+    A QRK NLK    W+
Sbjct: 95  ICGVLMPMFVVHFIFRYFAMQRKGNLKYFEGWY 127


>Z97628-2|CAB10726.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 364 DKLVEDLKSRTPIEXKKXKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 516
           +KL E L        K  +++  + L +P D    I FP R  S  YEM++
Sbjct: 137 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 187


>Z81080-5|CAB03088.2|  427|Caenorhabditis elegans Hypothetical
           protein F39H2.2a protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 364 DKLVEDLKSRTPIEXKKXKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 516
           +KL E L        K  +++  + L +P D    I FP R  S  YEM++
Sbjct: 137 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 187


>Z81080-2|CAD56584.1|  358|Caenorhabditis elegans Hypothetical
           protein F39H2.2b protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 364 DKLVEDLKSRTPIEXKKXKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 516
           +KL E L        K  +++  + L +P D    I FP R  S  YEM++
Sbjct: 68  EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 118


>AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK616.1 protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 277 KLKDIPTSANPKFFHMVEYFFHRACQVVED-KLVEDLKSRTPIEXKKXK 420
           K  ++P +  PK    V+    +  +  E+ K+VED K  +P+E KK K
Sbjct: 398 KKPEVPKNEEPKMEEPVKEEAPKVEEKKEEVKMVEDPKVESPLEVKKMK 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,847,109
Number of Sequences: 27780
Number of extensions: 280950
Number of successful extensions: 703
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)