Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O10
(567 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 226 4e-59
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 226 4e-59
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 226 4e-59
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 226 4e-59
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 135 1e-31
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 104 3e-22
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 48 2e-05
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 48 2e-05
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 226 bits (553), Expect = 4e-59
Identities = 102/131 (77%), Positives = 121/131 (92%)
Frame = +3
Query: 48 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 227
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 228 VDIRVTVKGGGHVXQVYAIRQAISKALIAFYXKYVHEASKXEIKXILVQYDRSLLVADPR 407
VDIRV VKGGGHV Q+YAIRQ+ISKAL+A+Y KYV EASK EIK IL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 408 RCEPKKFGGPG 440
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 226 bits (553), Expect = 4e-59
Identities = 102/131 (77%), Positives = 121/131 (92%)
Frame = +3
Query: 48 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 227
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 228 VDIRVTVKGGGHVXQVYAIRQAISKALIAFYXKYVHEASKXEIKXILVQYDRSLLVADPR 407
VDIRV VKGGGHV Q+YAIRQ+ISKAL+A+Y KYV EASK EIK IL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 408 RCEPKKFGGPG 440
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 226 bits (553), Expect = 4e-59
Identities = 102/131 (77%), Positives = 121/131 (92%)
Frame = +3
Query: 48 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 227
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 228 VDIRVTVKGGGHVXQVYAIRQAISKALIAFYXKYVHEASKXEIKXILVQYDRSLLVADPR 407
VDIRV VKGGGHV Q+YAIRQ+ISKAL+A+Y KYV EASK EIK IL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 408 RCEPKKFGGPG 440
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 226 bits (553), Expect = 4e-59
Identities = 102/131 (77%), Positives = 121/131 (92%)
Frame = +3
Query: 48 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 227
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 228 VDIRVTVKGGGHVXQVYAIRQAISKALIAFYXKYVHEASKXEIKXILVQYDRSLLVADPR 407
VDIRV VKGGGHV Q+YAIRQ+ISKAL+A+Y KYV EASK EIK IL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 408 RCEPKKFGGPG 440
RCE KKFGGPG
Sbjct: 126 RCESKKFGGPG 136
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 135 bits (326), Expect = 1e-31
Identities = 59/83 (71%), Positives = 74/83 (89%)
Frame = +3
Query: 48 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 227
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 228 VDIRVTVKGGGHVXQVYAIRQAI 296
VDIRV VKGGGHV Q+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 104 bits (249), Expect = 3e-22
Identities = 55/108 (50%), Positives = 73/108 (67%)
Frame = +3
Query: 51 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 230
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 231 DIRVTVKGGGHVXQVYAIRQAISKALIAFYXKYVHEASKXEIKXILVQ 374
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYV EAS+ EIK L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASE-EIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 48.0 bits (109), Expect = 2e-05
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +3
Query: 72 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 248
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 249 KGGGHVXQVYAIRQAISKALIAFYXKYVHEASKXEIKXILVQYDRSLLVADPRRCEPKKF 428
GGG Q AIR A++KAL +F ++ E++ + LL DPR E KK
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF-------VTEDEVEWM---RQAGLLTTDPRVRERKKP 382
Query: 429 GGPG 440
G G
Sbjct: 383 GQEG 386
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 48.0 bits (109), Expect = 2e-05
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +3
Query: 72 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 248
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 249 KGGGHVXQVYAIRQAISKALIAFYXKYVHEASKXEIKXILVQYDRSLLVADPRRCEPKKF 428
GGG Q AIR A++KAL +F ++ E++ + LL DPR E KK
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSF-------VTEDEVEWM---RQAGLLTTDPRVRERKKP 288
Query: 429 GGPG 440
G G
Sbjct: 289 GQEG 292
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,164,710
Number of Sequences: 237096
Number of extensions: 1917429
Number of successful extensions: 3938
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3938
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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