Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O09
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0119 + 25742277-25742434,25742976-25743061,25743146-257432...    56   3e-08
01_06_0671 - 31076463-31076610,31077060-31077202,31077758-310779...    44   8e-05
02_04_0464 - 23140764-23141224,23142288-23142447                       30   1.8  
01_05_0579 + 23393632-23393734,23393765-23394513,23395958-233963...    29   2.4  
03_02_0708 + 10577931-10579511,10579613-10579706,10580694-105808...    28   5.6  
05_03_0649 - 16566815-16567392,16567491-16567623,16568000-165687...    28   7.4  
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297...    27   9.8  

>05_06_0119 +
           25742277-25742434,25742976-25743061,25743146-25743223,
           25743919-25744031,25744094-25744171,25744941-25744949,
           25744981-25745082,25745165-25745714,25745941-25746146,
           25746868-25747031,25747157-25747310
          Length = 565

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +1

Query: 358 VNPFGVKFDIVTLEKAKCENV-GPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSL 534
           VNP G   + +T+ +A    + G P    SWFPGY+W I +C  C  ++GW F++T  +L
Sbjct: 482 VNPHGFVHETITVSRATGLALDGNPSTVHSWFPGYSWTIASCTDCESNIGWLFKATKKNL 541


>01_06_0671 -
           31076463-31076610,31077060-31077202,31077758-31077963,
           31078119-31078644,31078753-31078854,31079572-31079637,
           31079710-31079822,31080260-31080345,31081007-31081146
          Length = 509

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +1

Query: 421 GPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSL 534
           G P  A S FPGYTW I  C  C  ++GW F +   +L
Sbjct: 450 GAPSKAHSLFPGYTWTIALCAACESNIGWLFRAEKTNL 487


>02_04_0464 - 23140764-23141224,23142288-23142447
          Length = 206

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 415 NVGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSLTKA 543
           N   P GAD+ F     ++C  P      GW   S DL   KA
Sbjct: 69  NTSEPAGADAAFKSVKVKLCYAPASRTDRGWRKASDDLHKDKA 111


>01_05_0579 +
           23393632-23393734,23393765-23394513,23395958-23396315,
           23396830-23396852
          Length = 410

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 454 GYTWRICACPHCGQHLGWTFESTDLSLTKAKEHVHSFHG 570
           G  WR C+  + G   GW+F+  +L     +E+  +FHG
Sbjct: 25  GACWRSCSQTYDGTLKGWSFQEVELLHMDHREN-QAFHG 62


>03_02_0708 +
           10577931-10579511,10579613-10579706,10580694-10580856,
           10581286-10581491,10581854-10582062
          Length = 750

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 277 FSKQSPGALTIDKQNLFGHQNATVQTLVNP 366
           FS++    +    ++L G +N+T+QTL+NP
Sbjct: 560 FSRRYERIIEFAVRDLMGGKNSTIQTLINP 589


>05_03_0649 -
           16566815-16567392,16567491-16567623,16568000-16568765,
           16569242-16569260,16569320-16569367,16569401-16569506
          Length = 549

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 513 KRP--AKVLATMRTCTYTPCVAGKPGISPLGWAHI 415
           +RP  A V A +R  T  P  A  P +SPL WA +
Sbjct: 507 RRPSMADVAARLREITAMPPDAATPKVSPLWWAEL 541


>01_04_0018 +
           15128174-15128316,15128445-15128544,15129573-15129758,
           15129877-15129924,15130006-15130209,15130476-15130565,
           15130667-15130747,15130827-15130889,15131794-15131832,
           15131914-15132000,15132103-15132252,15132331-15132386,
           15132493-15132775,15132989-15133132,15133233-15133451,
           15133528-15133695,15133868-15133969
          Length = 720

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 202 NSKNLGQELILCRKCGADVADSHYLFSKQSPGALTIDK 315
           N +N G +++LC +   D+A    LFS+ + G L + K
Sbjct: 243 NKENSGCKVLLCDEKTEDLARMFRLFSRITDGLLPVSK 280


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,227,001
Number of Sequences: 37544
Number of extensions: 338330
Number of successful extensions: 688
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)