Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O09
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067811-1|AAH67811.1|  441|Homo sapiens cereblon protein.             59   2e-08
BC017419-1|AAH17419.1|  442|Homo sapiens cereblon protein.             59   2e-08
AK027507-1|BAB55162.1|  442|Homo sapiens protein ( Homo sapiens ...    59   2e-08
AK094447-1|BAC04357.1|  153|Homo sapiens protein ( Homo sapiens ...    36   0.13 

>BC067811-1|AAH67811.1|  441|Homo sapiens cereblon protein.
          Length = 441

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 358 VNPFGVKFDIVTLEKAKCEN-VGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSL 534
           VNP G   + +T+ KA   N +G P    SWFPGY W +  C  C  H+GW F +T   +
Sbjct: 349 VNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDM 408

Query: 535 TKAK 546
           +  K
Sbjct: 409 SPQK 412


>BC017419-1|AAH17419.1|  442|Homo sapiens cereblon protein.
          Length = 442

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 358 VNPFGVKFDIVTLEKAKCEN-VGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSL 534
           VNP G   + +T+ KA   N +G P    SWFPGY W +  C  C  H+GW F +T   +
Sbjct: 350 VNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDM 409

Query: 535 TKAK 546
           +  K
Sbjct: 410 SPQK 413


>AK027507-1|BAB55162.1|  442|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14601 fis, clone NT2RP1000124. ).
          Length = 442

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 358 VNPFGVKFDIVTLEKAKCEN-VGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSL 534
           VNP G   + +T+ KA   N +G P    SWFPGY W +  C  C  H+GW F +T   +
Sbjct: 350 VNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDM 409

Query: 535 TKAK 546
           +  K
Sbjct: 410 SPQK 413


>AK094447-1|BAC04357.1|  153|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37128 fis, clone BRACE2022928. ).
          Length = 153

 Score = 35.9 bits (79), Expect = 0.13
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 451 PGYTWRICACPHCGQHLGWTFESTDLSLTKAKE 549
           P +T R+   PH G  LGWT  S +L+L  AKE
Sbjct: 47  PSFTLRLPQSPHWGPELGWTQRSQNLALHVAKE 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,652,053
Number of Sequences: 237096
Number of extensions: 2110412
Number of successful extensions: 3758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3758
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)