Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O09
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68008-1|CAA92002.1| 154|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z68507-4|CAA92828.2| 414|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 29 3.8
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 28 6.6
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 28 6.6
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 28 6.6
>Z68008-1|CAA92002.1| 154|Caenorhabditis elegans Hypothetical
protein R08B4.3 protein.
Length = 154
Score = 77.0 bits (181), Expect = 1e-14
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Frame = +1
Query: 202 NSKNLGQELILCRKCGADVADSHYLFSKQSPGALTIDKQNLFGHQNAT--VQTLVNPFGV 375
+++++G+ +LCR+CGA + L + + + F T V L NP
Sbjct: 14 STRHVGE--LLCRQCGASITRQSELINITGVDQSQLQYEYDFPLAGKTTKVNVLTNPENQ 71
Query: 376 KFDIVTLEKAKCENVGPPQGADSWFPGYTWRICACPHCGQHLGWTFESTDLSLTKAKEHV 555
KF + + A G PQ +W+PGY W IC C C +H+GW FE + K+
Sbjct: 72 KFHVFGAKTAHLHFHGTPQSHATWYPGYKWTICLCKSCSRHMGWYFEPEKSTAVSEKK-- 129
Query: 556 HSFHGFILSNVLGRKF 603
SF G +L NV+ +
Sbjct: 130 -SFVGLVLDNVISADY 144
>Z68507-4|CAA92828.2| 414|Caenorhabditis elegans Hypothetical
protein M18.6 protein.
Length = 414
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 352 TLVNPFGVKFDIVTLEKAK-CENVGPPQGADSWFPGYTWRICACPHCGQHLGWTFES 519
T VN G I L + + + PP +WFP Y W I C C +HLGW + S
Sbjct: 300 THVNAHGFVHKITLLSEIRNYDRATPPSYEFTWFPEYAWIIIQCSRCHEHLGWEYIS 356
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
protein F21H12.6 protein.
Length = 1374
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 VADSHYLFSKQSPGALTIDKQNLFGHQNATVQTLVNP-FGVKFDIVTLEKAKCENVGPPQ 432
V SH + + ++ LT ++ + G T F K D + A +VGP
Sbjct: 187 VGPSHNIAASEALKQLTEHEKVVGGTSEKTSDKWAREDFACKVDFLK-SMASVADVGPVA 245
Query: 433 GADSWFPGYTWRIC 474
+W G WR+C
Sbjct: 246 DVVTWHDGEMWRVC 259
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 459 VAGKPGISPLGWAHIFTF 406
+ GKPG P+GW + TF
Sbjct: 418 ITGKPGNGPVGWRDVITF 435
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 549 FLCFGKTQICRLKRPAKVL 493
F CF K QIC+ K+P +V+
Sbjct: 824 FHCFTKCQICKRKKPRRVI 842
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 549 FLCFGKTQICRLKRPAKVL 493
F CF K QIC+ K+P +V+
Sbjct: 839 FHCFTKCQICKRKKPRRVI 857
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 549 FLCFGKTQICRLKRPAKVL 493
F CF K QIC+ K+P +V+
Sbjct: 824 FHCFTKCQICKRKKPRRVI 842
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 549 FLCFGKTQICRLKRPAKVL 493
F CF K QIC+ K+P +V+
Sbjct: 839 FHCFTKCQICKRKKPRRVI 857
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 549 FLCFGKTQICRLKRPAKVL 493
F CF K QIC+ K+P +V+
Sbjct: 824 FHCFTKCQICKRKKPRRVI 842
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 549 FLCFGKTQICRLKRPAKVL 493
F CF K QIC+ K+P +V+
Sbjct: 839 FHCFTKCQICKRKKPRRVI 857
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 549 FLCFGKTQICRLKRPAKVL 493
F CF K QIC+ K+P +V+
Sbjct: 839 FHCFTKCQICKRKKPRRVI 857
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,540,137
Number of Sequences: 27780
Number of extensions: 318402
Number of successful extensions: 744
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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