Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O09
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    22   5.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.9  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   7.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.8  

>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 229 ILCRKCGADVADSHY 273
           +LCR CG   +  HY
Sbjct: 7   VLCRVCGDKASGFHY 21


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 229 ILCRKCGADVADSHY 273
           +LCR CG   +  HY
Sbjct: 65  VLCRVCGDKASGFHY 79


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 431 WGGPTFSHFAFSRVTISNFTPNGFTNVCTVA 339
           W G T     +  VT+      GFT +C+ A
Sbjct: 477 WLGETIEAKTYPEVTMLFSDIVGFTEICSTA 507


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = -1

Query: 637 IHFWHHYKRIRKIFSQVHY 581
           +H WHH   I K    + +
Sbjct: 470 LHHWHHCPEIYKAIEGIRF 488


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 471 YTPCVAGKPGISP 433
           Y P + GKP ISP
Sbjct: 738 YKPKILGKPTISP 750


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,746
Number of Sequences: 438
Number of extensions: 3634
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)