Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O06
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 38 0.009
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 35 0.050
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 33 0.15
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 32 0.47
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 32 0.47
SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044) 31 0.62
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 31 0.62
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 31 0.81
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 30 1.4
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 30 1.9
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 29 2.5
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 29 2.5
SB_19790| Best HMM Match : LRR_1 (HMM E-Value=0.00028) 29 2.5
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 29 3.3
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 28 7.6
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +2
Query: 329 NLVSVPKIP---EWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
NL S+P + E E+LDL++NKL ++ + L+ L L L+ NN++ +P
Sbjct: 533 NLTSIPDVVFHLESLEKLDLNNNKLTSIPAGITNLTKLTNLNLENNNISVVP 584
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 35.1 bits (77), Expect = 0.050
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNN 469
E L + NKLNN+ +L+TL +L+V+ N + N
Sbjct: 1 EHLSVKENKLNNIHGDLSTLKHLRVINARNNELKN 35
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 308 YVDCSKKNLVSVPKIPEWAEQLD---LSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
Y++ L VP++ E+L LS N++ + +LN L NL+ L LD N + ++P
Sbjct: 171 YLNLEANELKIVPEVVTKLEKLQVLILSDNEIGALPADLNALENLRELYLDDNRLMSLP 229
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
++L L HN + + +EL L NLK L L N +N++P
Sbjct: 72 QELYLQHNSIELLPDELGNLVNLKRLGLAHNKLNDVP 108
>SB_5807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
E+L+LS N+L + + L+ LKVL L N +NN+P
Sbjct: 111 EKLNLSGNRLESFGPSIFRLTQLKVLLLGGNKINNVP 147
>SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 192
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 353 PEWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
P+ E LDLS N+L+ + L NLK+L L NN++++
Sbjct: 86 PQALELLDLSFNELSTIDPVLLDFPNLKILCLQGNNISDL 125
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 236 SLFLSSSTLGEIYFCPLECACLHL----YVDCSKKNLVSVPKIPEWAEQLDLSHNKLNNV 403
SL L + L E F A HL ++C+ +++ ++LDLS N++ ++
Sbjct: 441 SLLLENCILTEEDFKRKNWANFHLRSLSLINCNLESIPDAILKQSSLKKLDLSRNRIKSI 500
Query: 404 TNELNTLSNLKVLKLDXNNMNN 469
++ LSNL+ L L N + +
Sbjct: 501 PAQIEELSNLETLNLASNKITS 522
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 32.3 bits (70), Expect = 0.35
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +2
Query: 209 SRLLLFI-TMSLFLSSS-TLGEIYFCPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDL 379
S L+L+I + +F+SS T G C CL V+C K+L ++P IP L+L
Sbjct: 9 SWLVLYIWILCVFVSSQQTEGTACLEIKPCYCLGNRVNCEGKHLTAIPVGIPSDITALNL 68
Query: 380 SHNKLNNV-TNELNTLSNLKVLKLDXNNMNNI 472
+N + ++ +L + LK L L N +I
Sbjct: 69 GYNNIVDLDPKQLLKFTALKELDLSRNFFTSI 100
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNT-LSNLKVLKLDXNNMN 466
E LDLSHNKL + LN L N++ L L N ++
Sbjct: 995 EVLDLSHNKLRAIPTNLNAKLGNIRKLNLANNQLS 1029
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
LD+++NKL ++ + LS+L+ L + NN+ ++P
Sbjct: 92 LDVANNKLKSLPKAIGGLSSLQTLDVQGNNLQSLP 126
>SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044)
Length = 899
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +2
Query: 356 EWAEQLDLSHNKLNN-----VTNELNTLSNLKVLKLDXNNMNN 469
+W E LS+N++ + + N L T S LK+L L NN+ N
Sbjct: 757 QWLETFILSYNQIGDEGAMSIANALKTNSTLKILDLTKNNIGN 799
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
E L+L+HNKL ++ L L+ LK LK N + P
Sbjct: 504 EVLELTHNKLEKLSASLGLLNKLKCLKFAKNRLRFPP 540
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
++L L+ NKL + + + L NL+ L D N + ++P
Sbjct: 458 QKLRLTDNKLRRLPDTIGRLHNLRFLHCDYNVLESLP 494
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
QLDLSHN + V+ L +LK L L+ NN+ ++
Sbjct: 130 QLDLSHNSIQFVSATPRDLRHLKSLILNHNNLQSL 164
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
L +S+ LN+V +E+ L NL+ L + N + +IP
Sbjct: 46 LQISNTSLNHVPDEIGNLINLRTLDMHRNAIKSIP 80
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 311 VDCSKKNLVSVPK---IPEWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
+D L S+P+ I E+LDL++N ++ + ++ +SNLK L L+ N + +
Sbjct: 132 LDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLREL 188
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
E LDLS+N+L+ + ++ L L+ L L+ N + +P
Sbjct: 55 ELLDLSYNRLSFIPADIGKLRALRELNLEGNQLGAMP 91
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+LD+S NK+ + + + L++L+ + N ++ +P
Sbjct: 341 ELDISSNKITALPKSIGKMERLEILRAESNPLDEVP 376
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+L+L+ N + + + + L NLK L NN+ +P
Sbjct: 269 ELNLNKNNIQELPYDFHLLKNLKTLFFSANNLEIVP 304
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNM 463
+L L HN+L + + L+NLKVL L NN+
Sbjct: 95 ELCLDHNQLTLLPSGFGRLTNLKVLCLSHNNL 126
>SB_19790| Best HMM Match : LRR_1 (HMM E-Value=0.00028)
Length = 74
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+LD+S NK+ + + + L++L+ + N ++ +P
Sbjct: 6 ELDISSNKITALPKSIGKMERLEILRAESNPLDEVP 41
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
LDL +N +N V L LK L L+ NN+ +P
Sbjct: 69 LDLRNNHINEVPENLGAHRCLKNLLLEGNNIRTLP 103
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNEL-NTLSNLKVLKLDXNNMNNIP 475
++DL++N L+ + EL NTL L+ L + NN+ ++P
Sbjct: 346 RIDLANNSLHELPEELLNTLPLLEELDVSNNNLVSLP 382
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+LDL NKL + + L ++ LK L L N + ++P
Sbjct: 398 RLDLQKNKLRKIPSGLLKMTCLKYLDLSDNELTDLP 433
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
++LDLSHN+L ++ + + +L + + N + +P
Sbjct: 133 QKLDLSHNQLLHLPENIGLMESLLSINVSYNELEALP 169
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,030,994
Number of Sequences: 59808
Number of extensions: 353525
Number of successful extensions: 839
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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