Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O06
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 37 0.014
AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical ... 36 0.025
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 33 0.23
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 32 0.41
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 31 0.54
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 31 0.54
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi... 31 0.94
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 31 0.94
AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna ... 31 0.94
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 31 0.94
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 30 1.2
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 30 1.2
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 30 1.2
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 30 1.2
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 30 1.2
Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 29 3.8
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 29 3.8
Z68753-6|CAD45610.1| 597|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68753-5|CAB54512.2| 613|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z68753-4|CAB54511.2| 606|Caenorhabditis elegans Hypothetical pr... 28 5.0
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 28 5.0
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 28 5.0
AY043268-1|AAK85706.1| 606|Caenorhabditis elegans CCR4 protein. 28 5.0
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 6.6
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 28 6.6
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 28 6.6
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 28 6.6
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +2
Query: 233 MSLFLSSSTLGEIYFCPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-- 403
+S++ S + I CP +C C VDC+K+ L ++P IP +A QL LS N ++ V
Sbjct: 472 VSMYADSCFIDSI--CPTQCDCYGTTVDCNKRGLNTIPTSIPRFATQLLLSGNNISTVDL 529
Query: 404 TNELNTLSNLKVLKLDXNNMNNI 472
+ ++ L NL+VL L N++ I
Sbjct: 530 NSNIHVLENLEVLDLSNNHITFI 552
Score = 48.4 bits (110), Expect = 4e-06
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 215 LLLFITMSLFLSSSTLGEIYFCPLECACLHLYVDCSKKNLVSVPK-IPEWAEQLDLSHNK 391
L+ FI + L S+T CP EC C+ V C + L VP+ IP +LDL N+
Sbjct: 2 LICFIFILLIPESAT------CPAECVCVDRTVSCVGQQLTEVPQNIPNDTIRLDLQDNE 55
Query: 392 LNNV-TNELNTLSNLKVLKLDXNNMNNI 472
+ + N+ ++L NLK L+L N + I
Sbjct: 56 ITKIGPNDFSSLMNLKALQLMDNQIVTI 83
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 278 CPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-TNELNTLSNLKVLKLD 451
CP +C+CL V CS KNL S P +IP +L L N +N + ++LN L +L L L
Sbjct: 677 CPPKCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLTKLDLS 736
Query: 452 XNNM 463
N +
Sbjct: 737 HNRL 740
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 278 CPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-TNELNTLSNLKVLKLD 451
CPL C C VDC L VP +P ++ L N+++++ ++ L NL L L
Sbjct: 260 CPLPCTCTGTTVDCRDSGLTYVPTNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLS 319
Query: 452 XNNMNNI 472
N + I
Sbjct: 320 KNIITEI 326
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +2
Query: 233 MSLFLSSSTLGEIYFCPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-- 403
+S++ S + I CP +C C VDC+K+ L ++P IP +A QL LS N ++ V
Sbjct: 472 VSMYADSCFIDSI--CPTQCDCYGTTVDCNKRGLNTIPTSIPRFATQLLLSGNNISTVDL 529
Query: 404 TNELNTLSNLKVLKLDXNNMNNI 472
+ ++ L NL+VL L N++ I
Sbjct: 530 NSNIHVLENLEVLDLSNNHITFI 552
Score = 48.4 bits (110), Expect = 4e-06
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 215 LLLFITMSLFLSSSTLGEIYFCPLECACLHLYVDCSKKNLVSVPK-IPEWAEQLDLSHNK 391
L+ FI + L S+T CP EC C+ V C + L VP+ IP +LDL N+
Sbjct: 2 LICFIFILLIPESAT------CPAECVCVDRTVSCVGQQLTEVPQNIPNDTIRLDLQDNE 55
Query: 392 LNNV-TNELNTLSNLKVLKLDXNNMNNI 472
+ + N+ ++L NLK L+L N + I
Sbjct: 56 ITKIGPNDFSSLMNLKALQLMDNQIVTI 83
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 278 CPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-TNELNTLSNLKVLKLD 451
CP +C+CL V CS KNL S P +IP +L L N +N + ++LN L +L L L
Sbjct: 677 CPPKCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLTKLDLS 736
Query: 452 XNNM 463
N +
Sbjct: 737 HNRL 740
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 278 CPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-TNELNTLSNLKVLKLD 451
CPL C C VDC L VP +P ++ L N+++++ ++ L NL L L
Sbjct: 260 CPLPCTCTGTTVDCRDSGLTYVPTNLPPSTTEIRLEQNQISSIPSHSFKNLKNLTRLDLS 319
Query: 452 XNNMNNI 472
N + I
Sbjct: 320 KNIITEI 326
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 278 CPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNVT-NELNTLSNLKVLKLD 451
CP EC C L V C KNL ++P IP L S+N LN+++ + L NL+ L L
Sbjct: 17 CPSECRCAGLDVHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSKSNFQALPNLQYLDLS 76
Query: 452 XNNMNNI 472
N++ +I
Sbjct: 77 NNSIRDI 83
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 278 CPLECACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNVT-NELNTLSNLKVLKLD 451
CP EC C L V C KNL ++P IP L S+N LN+++ + L NL+ L L
Sbjct: 17 CPSECRCAGLDVHCEGKNLTAIPGHIPIATTNLYFSNNLLNSLSKSNFQALPNLQYLDLS 76
Query: 452 XNNMNNI 472
N++ +I
Sbjct: 77 NNSIRDI 83
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 278 CPLECAC--LHLYVDCSKKNLVSVPK-IPEWAEQLDLSHNKLNNV-TNELNTLSNLKVLK 445
CP+EC C L VDCS L +PK I L + +N+++ + ++L + L+ L
Sbjct: 23 CPVECTCDKKGLVVDCSSSGLTRIPKNISRNVRSLVIRNNRIHKLKRSDLEGFNQLETLV 82
Query: 446 LDXNNMNNI 472
L N + I
Sbjct: 83 LTHNKIKII 91
>AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical
protein Y54E10A.6 protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +2
Query: 236 SLFLSSSTLGEIYFCPLE-CACLHLYVDCSKKNLVSVP------KIPEWAEQLDLSHNKL 394
SL L+++ L E F + + LH++ D + + +P + + LSHN +
Sbjct: 118 SLILNNNRLNESSFPDISNLSNLHIF-DAAHNTISKIPASLTSHNLSAKLHTIILSHNSI 176
Query: 395 NNVTNELNTLSNLKVLKLDXNNMNNIP 475
+ + L+ L LK LK+D N + ++P
Sbjct: 177 EVIPDSLSNLKQLKELKIDENKLKDVP 203
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 239 LFLSSSTLGEIYFCPLECACLHLYVDCSKKNLVSVPKIPEWAEQL---DLSHNKLNNVTN 409
L L+ +L + C+ L +++ K +L +P + + +L DLSHN L+ +
Sbjct: 50 LSLTGCSLHNLSSSIRSCSNL-MHLVLPKNDLKQLPDVFDCLPKLKFMDLSHNHLDALPA 108
Query: 410 ELNTLSNLKVLKLDXNNMN 466
++ NL+ L L+ N +N
Sbjct: 109 SISKCENLESLILNNNRLN 127
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 302 HLYVDCSKKNLVSVPKIPEWAEQLDLSHNKLNNVT-NELNTLSNLKVLKLDXN 457
H + KK++ K +LDL +N++ V+ N +TLS LKVL LD N
Sbjct: 237 HNVLQTVKKDVFDAAK--NTLHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGN 287
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 302 HLYVDCSKKNLVSVPKIPEWAEQLDLSHNKLNNVT-NELNTLSNLKVLKLDXN 457
H + KK++ K +LDL +N++ V+ N +TLS LKVL LD N
Sbjct: 237 HNVLQTVKKDVFDAAK--NTLHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGN 287
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
LD+S N + +TN L +L+ LKV+ ++ N + NI
Sbjct: 170 LDVSDNDIGFLTNTLISLTKLKVITMNNNKITNI 203
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNN 469
LDLS+NKL+ + ++ LS L+ LKL N +N+
Sbjct: 155 LDLSNNKLDMLPPQIRRLSMLQSLKLSNNPLNH 187
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+DLS N+L V L VL L NN+ IP
Sbjct: 108 IDLSRNQLREVPTNLEYAKGSIVLNLSYNNIETIP 142
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
L LS+NKL V ++ L+ LKLD N + +P
Sbjct: 321 LHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLP 355
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNN 469
LDLS+NKL+ + ++ LS L+ LKL N +N+
Sbjct: 155 LDLSNNKLDMLPPQIRRLSMLQSLKLSNNPLNH 187
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+DLS N+L V L VL L NN+ IP
Sbjct: 108 IDLSRNQLREVPTNLEYAKGSIVLNLSYNNIETIP 142
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
L LS+NKL V ++ L+ LKLD N + +P
Sbjct: 321 LHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLP 355
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
QL L+HNK++N+++ T S++ VL L N + +
Sbjct: 273 QLYLAHNKISNISSNAFTNSSIVVLVLSSNELKTL 307
>AF478687-1|AAL78657.1| 776|Caenorhabditis elegans systemic RNAi
enabling proteinSID-1 protein.
Length = 776
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 320 SKKNLVSVPKIPEWAEQLDLSHNKLNNVTNEL 415
S+ NL+S +P +DLSH++ N ++EL
Sbjct: 349 SQSNLISFSPVPSEQRDMDLSHDEQQNTSSEL 380
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 30.7 bits (66), Expect = 0.94
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
E LDLSHNKL V + + LK + L N + +
Sbjct: 404 ESLDLSHNKLTEVPAAIGKVEQLKKVDLSHNRIAKV 439
>AF101305-9|AAF98593.3| 776|Caenorhabditis elegans Systemic rna
interference defectiveprotein 1 protein.
Length = 776
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 320 SKKNLVSVPKIPEWAEQLDLSHNKLNNVTNEL 415
S+ NL+S +P +DLSH++ N ++EL
Sbjct: 349 SQSNLISFSPVPSEQRDMDLSHDEQQNTSSEL 380
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 30.7 bits (66), Expect = 0.94
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 365 EQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
E LDLSHNKL V + + LK + L N + +
Sbjct: 404 ESLDLSHNKLTEVPAAIGKVEQLKKVDLSHNRIAKV 439
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 311 VDCSKKNLVSVPK-IPEWAE--QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+D S + S+P I E + +L L NKL + E+ L NLK L L N + ++P
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 356 EWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNM 463
E E LDL HNKL V + + + +L+ L L N +
Sbjct: 142 ESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRI 177
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 311 VDCSKKNLVSVPK-IPEWAE--QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+D S + S+P I E + +L L NKL + E+ L NLK L L N + ++P
Sbjct: 77 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 134
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 356 EWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNM 463
E E LDL HNKL V + + + +L+ L L N +
Sbjct: 141 ESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRI 176
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 311 VDCSKKNLVSVPK-IPEWAE--QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+D S + S+P I E + +L L NKL + E+ L NLK L L N + ++P
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 356 EWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNM 463
E E LDL HNKL V + + + +L+ L L N +
Sbjct: 142 ESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRI 177
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 311 VDCSKKNLVSVPK-IPEWAE--QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+D S + S+P I E + +L L NKL + E+ L NLK L L N + ++P
Sbjct: 78 LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 356 EWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNM 463
E E LDL HNKL V + + + +L+ L L N +
Sbjct: 142 ESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRI 177
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 296 CLHLYVDCSKKNLVSVPKIPEWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNI 472
CL L +D S ++ + ++P +DLSHNKL + +L N + L L N + ++
Sbjct: 674 CLKL-LDASFNHISKIEQLPSSLLHVDLSHNKLQTLV-FCQSLGNTRHLLLHRNQIKSM 730
>Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical
protein C34C12.5 protein.
Length = 268
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+L LSHNKL +V + L +L+ L L N + ++P
Sbjct: 37 RLTLSHNKLTSVPPNIADLVSLQSLNLWNNQIEDLP 72
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 368 QLDLSHNKLNNV-TNELNTLSNLKVLKLDXNNMN 466
QLDLSHN L+ + T L L +L++L L+ N ++
Sbjct: 5 QLDLSHNNLSVIPTWALTYLHSLQILHLENNRID 38
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 290 CACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-TNELNTLSNLKVLKLDXNNM 463
C C+ VDCS +L +P IP L LS N++ ++ + L L+ L + N +
Sbjct: 29 CHCVGNVVDCSSLDLSEIPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNII 88
Query: 464 NNI 472
+I
Sbjct: 89 RHI 91
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 290 CACLHLYVDCSKKNLVSVP-KIPEWAEQLDLSHNKLNNV-TNELNTLSNLKVLKLDXNNM 463
C C+ VDCS +L +P IP L LS N++ ++ + L L+ L + N +
Sbjct: 29 CHCVGNVVDCSSLDLSEIPTTIPNNTRILLLSDNEIESIDKSRLKGFYFLQTLDISNNII 88
Query: 464 NNI 472
+I
Sbjct: 89 RHI 91
>Z68753-6|CAD45610.1| 597|Caenorhabditis elegans Hypothetical
protein ZC518.3c protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
LD+S+NKL ++ EL + +L L L+ N + +P
Sbjct: 106 LDISNNKLRSLPTELGDMISLCHLYLNNNQLRVLP 140
>Z68753-5|CAB54512.2| 613|Caenorhabditis elegans Hypothetical
protein ZC518.3b protein.
Length = 613
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
LD+S+NKL ++ EL + +L L L+ N + +P
Sbjct: 122 LDISNNKLRSLPTELGDMISLCHLYLNNNQLRVLP 156
>Z68753-4|CAB54511.2| 606|Caenorhabditis elegans Hypothetical
protein ZC518.3a protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
LD+S+NKL ++ EL + +L L L+ N + +P
Sbjct: 115 LDISNNKLRSLPTELGDMISLCHLYLNNNQLRVLP 149
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 125 EFSN*FTYGLNYVSRNR*TTIASTKMGDSRLLLFITMSLFLSSS 256
EF N FT+ NY N T+ + M R+LLF+ S ++S+S
Sbjct: 459 EFGNCFTF--NYDVNNNYTSSRAGPMYGIRVLLFVNTSDYMSTS 500
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 125 EFSN*FTYGLNYVSRNR*TTIASTKMGDSRLLLFITMSLFLSSS 256
EF N FT+ NY N T+ + M R+LLF+ S ++S+S
Sbjct: 459 EFGNCFTF--NYDVNNNYTSSRAGPMYGIRVLLFVNTSDYMSTS 500
>AY043268-1|AAK85706.1| 606|Caenorhabditis elegans CCR4 protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 371 LDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
LD+S+NKL ++ EL + +L L L+ N + +P
Sbjct: 115 LDISNNKLRSLPTELGDMISLCHLYLNNNQLRVLP 149
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
protein F43C1.1 protein.
Length = 1036
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 275 FCPLECA-CLHLYVDCSKKNLVSVPKIPEWAEQLDLSHNKLNNVTNE-LNTLSNLKVLKL 448
FC L+ C + Y+ +N V V + + +DLSHN+LN+ + L++L L+ L L
Sbjct: 509 FCRLQILRCANNYLT---ENSVPVIVNMKHLKIIDLSHNRLNSFDDSALSSLELLEDLNL 565
Query: 449 DXNNMNNI 472
N + +
Sbjct: 566 SSNRLTRL 573
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+L L N L ++ + + L L L +D NN+++IP
Sbjct: 293 ELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIP 328
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+L L N L ++ + + L L L +D NN+++IP
Sbjct: 293 ELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIP 328
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 368 QLDLSHNKLNNVTNELNTLSNLKVLKLDXNNMNNIP 475
+L L N L ++ + + L L L +D NN+++IP
Sbjct: 293 ELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIP 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,804,823
Number of Sequences: 27780
Number of extensions: 278523
Number of successful extensions: 742
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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