Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_O06
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    28   0.090
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 317 CSKKNLVSVPKIPEWAEQLDLSHNKLNNVTNELNTLSNLKVLKLDXNN 460
           CS K L    K  +  +Q+++ HN   N T  +  L +L V  +D  N
Sbjct: 156 CSPKLLTFDLKTSKLVKQVEIPHNIAVNATTGMGELVSLAVQAIDRTN 203


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 299 LHLYVDCSKKNLVSVPKIPEWAEQLDLSHNKLNNVTNELNTL 424
           + LY++C+ K    V K   + E +     K+    NE+N L
Sbjct: 59  VQLYIECAMKKFSFVDKDGNFNEHVSREIAKIFLNENEINQL 100


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 42  LFFECNFVYESKMQIFYVQQISEVIFAWN 128
           LF+  +F+  S +  FY+  I  V   +N
Sbjct: 337 LFYNTDFIIYSSLSSFYIPCIIMVFLYYN 365


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
 Frame = +2

Query: 140 FTYG-LNYVSRNR*TTIASTKMGDSRLLLFITMSLFLSSSTLGEIYFCPLECACLHLYVD 316
           FTY  L  V      ++A   +  + L++   ++  L    +  I+ C L   C  L   
Sbjct: 62  FTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCT 121

Query: 317 CSKKNLVSVPKIPEWAEQLDLSHNKLNNVTNELNTLSNLKVL 442
            S  NL ++     WA    +++ +   +   L T++ + +L
Sbjct: 122 ASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWIL 163


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
 Frame = +2

Query: 140 FTYG-LNYVSRNR*TTIASTKMGDSRLLLFITMSLFLSSSTLGEIYFCPLECACLHLYVD 316
           FTY  L  V      ++A   +  + L++   ++  L    +  I+ C L   C  L   
Sbjct: 62  FTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCT 121

Query: 317 CSKKNLVSVPKIPEWAEQLDLSHNKLNNVTNELNTLSNLKVL 442
            S  NL ++     WA    +++ +   +   L T++ + +L
Sbjct: 122 ASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWIL 163


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
 Frame = +2

Query: 140 FTYG-LNYVSRNR*TTIASTKMGDSRLLLFITMSLFLSSSTLGEIYFCPLECACLHLYVD 316
           FTY  L  V      ++A   +  + L++   ++  L    +  I+ C L   C  L   
Sbjct: 62  FTYRPLRIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCT 121

Query: 317 CSKKNLVSVPKIPEWAEQLDLSHNKLNNVTNELNTLSNLKVL 442
            S  NL ++     WA    +++ +   +   L T++ + +L
Sbjct: 122 ASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWIL 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,360
Number of Sequences: 438
Number of extensions: 3245
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)