Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_O04
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048196-1|AAH48196.1| 256|Homo sapiens GIT1 protein protein. 35 0.22
AB065600-1|BAC05828.1| 727|Homo sapiens seven transmembrane hel... 34 0.50
AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protei... 31 2.7
BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated ind... 31 2.7
AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protei... 31 2.7
AL834165-1|CAD38868.1| 707|Homo sapiens hypothetical protein pr... 31 2.7
AC118060-1|AAX88975.1| 315|Homo sapiens unknown protein. 31 2.7
AB067480-1|BAB67786.1| 800|Homo sapiens KIAA1893 protein protein. 31 2.7
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 30 6.1
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 30 6.1
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 30 6.1
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 30 8.1
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 30 8.1
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 30 8.1
>BC048196-1|AAH48196.1| 256|Homo sapiens GIT1 protein protein.
Length = 256
Score = 35.1 bits (77), Expect = 0.22
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +3
Query: 81 GARLSSRVAPPPRLVATLTSSIPNRSHRGPGAVPFHQAQRALSATDKEMSRKRPTA 248
G RL+ R P L S R GP P AQRA +A+ MSRK P A
Sbjct: 33 GGRLAGRAEPRRGLAGAGPGSRGRRRRPGPPPAPPTLAQRAAAASPLRMSRKGPRA 88
>AB065600-1|BAC05828.1| 727|Homo sapiens seven transmembrane helix
receptor protein.
Length = 727
Score = 33.9 bits (74), Expect = 0.50
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 231 GSSPCPWLKVLVALG--GTARRPVLGGSGSESKMLVWPPAGGA 109
GS CPW +L+ G P+L + + + MLV PP G A
Sbjct: 243 GSERCPWASLLLPCSACGAVPSPLLSSASARNAMLVVPPGGRA 285
>AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 710
Score = 32.7 bits (71), Expect = 1.1
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 83 SSSIKQGCSAPPAGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 262
+S + +A PA H + PP T A+PP+ +T S + P T + AT
Sbjct: 226 TSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQSPVITTTAAHAT 285
Query: 263 NGQSTP 280
+ P
Sbjct: 286 DSALRP 291
>BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protein,
130kDa protein.
Length = 1048
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 83 SSSIKQGCSAPPAGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 262
+S + +A PA H + PP T A+PP+ +T S + P T + AT
Sbjct: 252 TSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQSPVITTTAAHAT 311
Query: 263 N 265
+
Sbjct: 312 D 312
>BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated
inducer of neurite outgrowth 1 protein.
Length = 1008
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 113 PPAGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 280
P + G TN S P PR+ A PPSA + G+GD P ++ + +G++ P
Sbjct: 481 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 537
>AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protein
130 protein.
Length = 1048
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 83 SSSIKQGCSAPPAGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 262
+S + +A PA H + PP T A+PP+ +T S + P T + AT
Sbjct: 252 TSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQSPVITTTAAHAT 311
Query: 263 N 265
+
Sbjct: 312 D 312
>AL834165-1|CAD38868.1| 707|Homo sapiens hypothetical protein
protein.
Length = 707
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 113 PPAGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 280
P + G TN S P PR+ A PPSA + G+GD P ++ + +G++ P
Sbjct: 291 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 347
>AC118060-1|AAX88975.1| 315|Homo sapiens unknown protein.
Length = 315
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 83 SSSIKQGCSAPPAGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT 262
+S + +A PA H + PP T A+PP+ +T S + P T + AT
Sbjct: 252 TSQLPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQSPVITTTAAHAT 311
Query: 263 N 265
+
Sbjct: 312 D 312
>AB067480-1|BAB67786.1| 800|Homo sapiens KIAA1893 protein protein.
Length = 800
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 113 PPAGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 280
P + G TN S P PR+ A PPSA + G+GD P ++ + +G++ P
Sbjct: 483 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 539
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 140 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST 277
F P PP +G PPS ++ S G GTS AT +T
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 435
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 140 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST 277
F P PP +G PPS ++ S G GTS AT +T
Sbjct: 391 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 435
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +2
Query: 140 FDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST 277
F P PP +G PPS ++ S G GTS AT +T
Sbjct: 354 FPPVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTS-ATAASAT 398
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 29.9 bits (64), Expect = 8.1
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +2
Query: 89 SIKQGCSAPPAGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVA 259
++ + PP GG D PP + A+PP A F G P A + A
Sbjct: 112 ALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAAAAA 167
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 29.9 bits (64), Expect = 8.1
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +2
Query: 89 SIKQGCSAPPAGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVA 259
++ + PP GG D PP + A+PP A F G P A + A
Sbjct: 112 ALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAAAAA 167
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
250a protein.
Length = 2285
Score = 29.9 bits (64), Expect = 8.1
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +2
Query: 89 SIKQGCSAPPAGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVA 259
++ + PP GG D PP + A+PP A F G P A + A
Sbjct: 112 ALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYG-FGQPYGRSPSAVAAAAAA 167
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,927,897
Number of Sequences: 237096
Number of extensions: 1869159
Number of successful extensions: 5874
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5835
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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