Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_N24
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0630 - 18182681-18182931,18183397-18183463,18184899-181849... 30 1.4
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 30 1.4
08_02_0823 + 21557111-21557292,21557391-21557473,21557722-215578... 30 1.9
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 29 3.2
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 29 3.2
04_03_0733 + 19116771-19116957,19117733-19117858,19117946-191180... 29 3.2
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 29 4.3
11_06_0657 + 25938382-25938443,25938511-25938718,25939222-259392... 28 5.6
01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320 28 5.6
01_01_0437 - 3293624-3294029,3294094-3294212 28 5.6
05_04_0224 - 19198722-19198835,19198947-19199436,19200478-192006... 28 7.5
01_07_0082 - 40965947-40967023 28 7.5
01_01_0434 - 3287323-3287710,3287736-3287890 28 7.5
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 27 9.9
03_02_0647 + 10154668-10156041 27 9.9
>04_03_0630 -
18182681-18182931,18183397-18183463,18184899-18184964,
18185057-18185178,18185263-18185425,18186082-18186329,
18186418-18186751,18186857-18187000,18187079-18187144
Length = 486
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 227 DTPQPEAYLFGENADLNFLGSRPTPFPYPPPQSNEPTKTLKSLXNIRKE 373
+TP PE N + + P P P P PQ P K+ S+ + KE
Sbjct: 222 ETPIPEVIDEVPNNVAVAMPTPPAPAPAPVPQEEAPKKSYASIVKVMKE 270
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 170 PPRSGNYFGSHFIMGGERFDTPQPEAYLFGENADLNFLGSRPTPFPYPPPQSNEP 334
PP++G G F G PQP + N G +PPPQ N+P
Sbjct: 20 PPQAGGGGGGEFYRG----PPPQPPMRQLSAASSTNIPGDYAAHQGHPPPQQNQP 70
>08_02_0823 +
21557111-21557292,21557391-21557473,21557722-21557810,
21557985-21558058,21558264-21558314,21558406-21558482,
21560206-21560900
Length = 416
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 293 PTPFPYPPPQSNEPTKTLKSLXNIRKESLRFIRCPEP 403
P+P P PPPQ +PT N+ S+ RC P
Sbjct: 340 PSPLPSPPPQ-QQPTVPKDDQYNVDMSSVAAARCSFP 375
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 29.1 bits (62), Expect = 3.2
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = +2
Query: 275 NFLGSRPT--PFPYPPPQSNEPTKTLKSLXNIRKESLRFIRCPEPLSKLXDNQIGDGVMK 448
NF PT P P PP ++ T+++ N++KE+LR EP
Sbjct: 133 NFSYGPPTQPPAPAPPYVEHQKAVTIRNDVNLKKETLRV----EP--------------- 173
Query: 449 SPESNGKGTYYNIEFTFDCD-ARCAITVHYFCTEEVTPAGVVYYPRDPTMSSQTYHYKKG 625
E G+ + I FTFD A ++TV++F EE+ + ++ + T +K+G
Sbjct: 174 DDECPGR---FLITFTFDATVAGRSMTVYFFAKEELNCN--LTATKEDLLKPVTVTFKEG 228
Query: 626 ANQQFCQIS 652
Q+F Q S
Sbjct: 229 LGQKFRQPS 237
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 269 DLNFLGSRPTPFPYPPPQSNEPTKTLKSLXNIRKESLRF 385
D+ L P P P PPP +P KS R S ++
Sbjct: 134 DIRILAHAPPPAPPPPPPQPQPQAAKKSRRGPRSRSSQY 172
>04_03_0733 +
19116771-19116957,19117733-19117858,19117946-19118061,
19118395-19118483,19118692-19118743,19119361-19119829,
19120985-19121367,19121450-19122132,19122561-19123152,
19123255-19123638,19124106-19124114
Length = 1029
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 424 PDW*WCYEITRIKWKGDIL 480
P+W +CYEIT++ GD L
Sbjct: 464 PEWTYCYEITKVIITGDFL 482
>01_06_0866 -
32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = +2
Query: 173 PRSGNYFGSHFIMGGERFDTPQP------EAYLFGENADLNFLGSRPTPFPYPPPQSNE 331
P FG+ + G F TP+ EA+ A + L S P P P PPP N+
Sbjct: 27 PAHAPLFGATVSVNGVEFRTPEDAARSAKEAHNIAAKAAFDHLSSLPLP-PPPPPSENQ 84
>11_06_0657 +
25938382-25938443,25938511-25938718,25939222-25939268,
25939473-25939805,25940529-25940613,25940689-25940884,
25941012-25941182,25941261-25941318,25941429-25941657,
25942296-25943183
Length = 758
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Frame = +2
Query: 134 DADIISNHAYKYPPRSGNYFGSHFIMG----GERFDTPQPEAYLFGENADLNFLGSRPTP 301
D D+I NHA K PR NY M E F T YL G +P+P
Sbjct: 254 DWDMIINHALKCKPRPANYSSYTEEMNVHQEHESFHTSNGNCYLKGS------CSMQPSP 307
Query: 302 FPYPPPQSNEPTKTLKSLXNIRKESLRFIR 391
P P S T+ + + ++ + RF++
Sbjct: 308 APANLPVSENHTEQI-DIQLSKQHASRFLQ 336
>01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320
Length = 313
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 422 NQIGDGVMKSPESNGK-GTYYNIEFTFDCDARCAITVHYFCTEEVTPAGVVYYPRDPTMS 598
N GD + P+ + G + F+FD D +ITV +F E+ + ++ +
Sbjct: 66 NVKGDTLRLVPDDDDDDGRSLLLAFSFDADGPGSITVCFFAQEDKC---ALKTAKENLLQ 122
Query: 599 SQTYHYKKGANQQFCQIS 652
T +K+G Q+F Q S
Sbjct: 123 PVTVPFKEGRGQEFKQPS 140
>01_01_0437 - 3293624-3294029,3294094-3294212
Length = 174
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 251 LFGENADLNFLGSRPTPFPYPPPQSNEPTKTLKSLXNIR 367
L A N+ + P+P P PPPQ K SL ++
Sbjct: 15 LLAAGATANYGYTTPSPSPPPPPQQQAARKGTHSLEGVK 53
>05_04_0224 -
19198722-19198835,19198947-19199436,19200478-19200641,
19202534-19202632,19204069-19204175,19204278-19204401,
19205113-19205242,19205314-19205433,19205861-19206002,
19207243-19207326,19207651-19207742,19207855-19207944,
19208057-19208136,19208312-19208451,19208587-19209067
Length = 818
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 485 IEFTFDCDARCAITVHYFCTEEVTPAGVVYYPRDPTMSSQTYHYKKGANQQFCQIS 652
+ FTFD +IT++YF E YP T + ++KG Q+F Q S
Sbjct: 607 VAFTFDAVTDGSITIYYFGKEGKNCTFSSVYPELQTPTK--IPFQKGLAQKFVQTS 660
>01_07_0082 - 40965947-40967023
Length = 358
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 233 PQPEAYLFGENADLNFLGSRPTPFPYPPP-QSNEPT 337
P P AY AD + + P YPPP + NEP+
Sbjct: 177 PPPTAYPTAAKADGSAAAAYPPQSAYPPPGKGNEPS 212
>01_01_0434 - 3287323-3287710,3287736-3287890
Length = 180
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 251 LFGENADLNFLGSRPTPFPYPPPQS-NEPTKTLKSLXNIRKESLRFIRCPEPLSK 412
L A N+ + P+P P PPPQ P + K L + + +PLSK
Sbjct: 15 LLAAGATANYGYTTPSPSPPPPPQQYTPPAHSDKLLVRAACKETHSLEDAKPLSK 69
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 305 PYPPPQSNEPTKTLKSLXNIRKESL 379
PYP P E T+T+K + NI K L
Sbjct: 681 PYPSPSDVELTETIKYIENISKPVL 705
>03_02_0647 + 10154668-10156041
Length = 457
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 344 AFS*ARLTAAGGKGTESVYCLESSNQHFHQRGKPLVVEY 228
AF+ + A GG ++ CLES + + P VVEY
Sbjct: 28 AFAVKSVEAKGGAPAAAMACLESEIRILRRLSSPYVVEY 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,832,697
Number of Sequences: 37544
Number of extensions: 341698
Number of successful extensions: 1238
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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