Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_N24
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 31 0.71
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 31 0.71
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 29 3.8
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 29 3.8
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 27 8.8
U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical pr... 27 8.8
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 27 8.8
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 27 8.8
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 8.8
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 116 bits (279), Expect = 1e-26
Identities = 64/156 (41%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Frame = +2
Query: 179 SGNYFGSHFIMGGERFDTPQPEAYLFGENADLNFLGSRPTPFPYPP-PQSNEPTKTLKSL 355
+G+YFGSHF+M G +F+ +PEAYLFGEN+DL+ LGSR FPYPP P N+ + L L
Sbjct: 35 AGSYFGSHFLMCGCKFEMARPEAYLFGENSDLDQLGSRALSFPYPPGPLGNDEIRPLNLL 94
Query: 356 XNIRKESLRFIRCPEPLSKLXDNQIGDGVMKSPESNGKGTYYNIEFTFDCDARCAITVHY 535
NIRKES++F R + +L N Y + F FDCD+ C I VH+
Sbjct: 95 VNIRKESVKFQRVKKDNGELNAN-----------------LYQLTFVFDCDSACVIQVHF 137
Query: 536 FCTEEVTPAGVVY-YPRDPTMSSQTYHYKKGANQQF 640
E + + Y SS+T+H++ GA+Q F
Sbjct: 138 HAKEMYHDGEIQFAYRNRRPQSSETFHFETGADQVF 173
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +2
Query: 296 TPFPYPPPQSNEPTKTLKSLXNIRKESLRFIRCPEPLSKLXDNQIGDGVMKSPESNGKGT 475
T F PPP+S + +L+ I S + + KL +N+ G+ GT
Sbjct: 126 TAFSSPPPKSMKTPDSLRKSIRISSPSPFKVTFSKTPLKLSNNENVTGI----HIGRSGT 181
Query: 476 YYNIEFTFDCDARCAI 523
YYN + T RC +
Sbjct: 182 YYNKQVTGSASKRCLL 197
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 31.1 bits (67), Expect = 0.71
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +2
Query: 296 TPFPYPPPQSNEPTKTLKSLXNIRKESLRFIRCPEPLSKLXDNQIGDGVMKSPESNGKGT 475
T F PPP+S + +L+ I S + + KL +N+ G+ GT
Sbjct: 126 TAFSSPPPKSMKTPDSLRKSIRISSPSPFKVTFSKTPLKLSNNENVTGI----HIGRSGT 181
Query: 476 YYNIEFTFDCDARCAI 523
YYN + T RC +
Sbjct: 182 YYNKQVTGSASKRCLL 197
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 299 PFPYPPPQSNEPTKTLKSLXN 361
PFP PPPQ N K LKS+ N
Sbjct: 645 PFP-PPPQQNTKPKLLKSVLN 664
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 299 PFPYPPPQSNEPTKTLKSLXN 361
PFP PPPQ N K LKS+ N
Sbjct: 650 PFP-PPPQQNTKPKLLKSVLN 669
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 299 PFPYPPPQSNEPTKTLKSLXN 361
PFP PPPQ N K LKS+ N
Sbjct: 660 PFP-PPPQQNTKPKLLKSVLN 679
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 299 PFPYPPPQSNEPTKTLKSLXN 361
PFP PPPQ N K LKS+ N
Sbjct: 511 PFP-PPPQQNTKPKLLKSVLN 530
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 305 PYPPPQSNEPTKTLKSLXNIRKESLRFIRCPEP 403
P PPP E KT S R ES+R + P P
Sbjct: 877 PLPPPLPKEKPKTASSTSLRRNESIRPEQAPPP 909
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 305 PYPPPQSNEPTKTLKSLXNIRKESLRFIRCPEP 403
P PPP E KT S R ES+R + P P
Sbjct: 877 PLPPPLPKEKPKTASSTSLRRNESIRPEQAPPP 909
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 362 IRKESLRFIRCPEPLSKLXDNQIGDGVMKSPESNGKGTYYNIEFTF 499
I K+ RFI L + DNQI D + + +G G EFT+
Sbjct: 147 ISKKDFRFIL--RELGDITDNQIIDEIFNEADVDGNGVIDYDEFTY 190
>U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical
protein F22F4.1 protein.
Length = 556
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 293 PTPFPYPPPQSNE 331
PTP P PPPQS+E
Sbjct: 59 PTPAPTPPPQSSE 71
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Frame = +2
Query: 194 GSHFIMGGERFDTPQPE--------AYLFGENADLNFLGSRPTP 301
GSH +MGG R DTP + + L E+ N +G P+P
Sbjct: 155 GSHLLMGGIRPDTPTNDRSTDLGSISSLLNEDHHTNTIGQSPSP 198
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Frame = +2
Query: 194 GSHFIMGGERFDTPQPE--------AYLFGENADLNFLGSRPTP 301
GSH +MGG R DTP + + L E+ N +G P+P
Sbjct: 155 GSHLLMGGIRPDTPTNDRSTDLGSISSLLNEDHHTNTIGQSPSP 198
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 260 ENADLNFLGSRPTPFPYPPPQSNEPTKTLKSLXNIRKES 376
ENA + PTP PPP + PT TLK + K S
Sbjct: 146 ENATTKEKVTTPTP---PPPTTTTPTTTLKPTTSPEKHS 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,530,653
Number of Sequences: 27780
Number of extensions: 286991
Number of successful extensions: 871
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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