Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_N15
         (578 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22WT2 Cluster: Putative uncharacterized protein; n=9; ...    33   4.9  
UniRef50_Q54S42 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  

>UniRef50_Q22WT2 Cluster: Putative uncharacterized protein; n=9;
            Eukaryota|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 2388

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +1

Query: 10   KLFTNPTYLLITNQPNYYQLITNQIIKLFNIHKHCIKVLFNSTD*NL 150
            +LFT      IT++ N+Y+LITN +I +F + K  +  +FN T  N+
Sbjct: 1308 ELFTVIQKDFITDRINFYKLITNNVIAIFFVDKFEL-FIFNGTKFNM 1353


>UniRef50_Q54S42 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1459

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 458  FFYDHWLLDLIAIVRSIKIFNNILRFSFLNDL 363
            + YDHWL+  +  V SI +F   L FSF N++
Sbjct: 906  YLYDHWLVLKVYNVISISLFEFDLNFSFSNEM 937


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,372,890
Number of Sequences: 1657284
Number of extensions: 9737444
Number of successful extensions: 18694
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18686
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)