BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_N15 (578 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0030 - 296681-296789,296903-297105,297348-297426,297512-29... 29 3.5 >06_01_0030 - 296681-296789,296903-297105,297348-297426,297512-297877, 298590-298956,299235-299373,299461-299731,299849-299958, 300567-300704 Length = 593 Score = 28.7 bits (61), Expect = 3.5 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = +3 Query: 414 PDNGY*VE*PMVVKKSQLYCFALKDLKNNN*PHSN 518 PD GY V MV + LYC LKD + PH + Sbjct: 532 PDGGYNVT-EMVAPDNMLYCGLLKDKQKAQKPHGS 565 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,073,494 Number of Sequences: 37544 Number of extensions: 237603 Number of successful extensions: 390 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 384 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 390 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1352600424 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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