Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_N12
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.41 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 167  WITYPFTWWSS 199
            W T P TWWSS
Sbjct: 1035 WTTKPSTWWSS 1045



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 293  NTKPENDLSTLKPTTTIIISTLQP 364
            N K +   +T+KPTTTI     +P
Sbjct: 2205 NDKTKPKPTTMKPTTTIGYEPQEP 2228


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 193 PPCERVSYPSPYSRPDPTTPKRV 125
           PP E  + P+P   P P++P+ +
Sbjct: 47  PPEEEAASPTPGDVPTPSSPRSI 69


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 105  LRQSCTKHKQENSQEFITDHVAVQV 31
            L   CTK K+E S   + D  AV++
Sbjct: 1362 LNLCCTKKKEELSPNALLDKQAVEI 1386


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 105  LRQSCTKHKQENSQEFITDHVAVQV 31
            L   CTK K+E S   + D  AV++
Sbjct: 1362 LNLCCTKKKEELSPNALLDKQAVEI 1386


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 105  LRQSCTKHKQENSQEFITDHVAVQV 31
            L   CTK K+E S   + D  AV++
Sbjct: 1362 LNLCCTKKKEELSPNALLDKQAVEI 1386


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 105  LRQSCTKHKQENSQEFITDHVAVQV 31
            L   CTK K+E S   + D  AV++
Sbjct: 1362 LNLCCTKKKEELSPNALLDKQAVEI 1386


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +2

Query: 260 IXIDTSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIA 382
           + I    P   + +P  +++     T+ +I+T  PS+ P+A
Sbjct: 236 VNIKKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASPLA 276


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 120 NMTRFGVVGSGRLY 161
           NMT+FG   S ++Y
Sbjct: 268 NMTKFGAYSSDKIY 281


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 190 PCERVSYPSPYSRPDPT 140
           P + +   +PYS P PT
Sbjct: 287 PPDHIQQATPYSAPGPT 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,561
Number of Sequences: 336
Number of extensions: 2991
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)