Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_N12
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.2  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           25   1.6  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   3.6  
AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related prote...    24   3.6  
AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.            24   3.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.4  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   8.4  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +2

Query: 272 TSRPTEVNTKPENDLSTLKPTTTIII---STLQPSSVPIASGLEEVNSTVEXRPLELE 436
           T + TEV  K   +L+TLK  T +++     LQ   + +   ++E  S +     EL+
Sbjct: 438 TRQKTEVEAKLTANLATLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELK 495


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 272 TSRPTEVNTKPENDLSTLKPTTTIIISTLQPSSVPIASG 388
           T  PT     P    +T+ PTTT  ++  Q ++  +ASG
Sbjct: 35  TVAPTTTTVAPTTT-TTVAPTTTTTVAPGQTTTTTVASG 72


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 399 LIPRSXNDP*NWKLFYRLQLWEP 467
           L+P    DP N+KL + ++ W P
Sbjct: 915 LVPTLERDPMNFKLCWHVRDWTP 937


>AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related protein
           protein.
          Length = 103

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 399 LIPRSXNDP*NWKLFYRLQLWEP 467
           L+P    DP N+KL + ++ W P
Sbjct: 8   LVPTLERDPMNFKLCWHVRDWTP 30


>AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.
          Length = 116

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 399 LIPRSXNDP*NWKLFYRLQLWEP 467
           L+P    DP N+KL + ++ W P
Sbjct: 16  LVPTLERDPMNFKLCWHVRDWTP 38


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 17/63 (26%), Positives = 24/63 (38%)
 Frame = +2

Query: 62  SWEFSCLCLVHDCLSKPTTEHDPFRGRGIGSTIWGWITYPFTWWSSGEPELAPGSDQLLA 241
           S E S L  +HDC+S  T    P         + G    P   WS+ +P  +P    +  
Sbjct: 195 SSEISTLRSLHDCISSFTLRLKP----SDLLFVIGDFNQPSISWSTADPSSSPAYSSITH 250

Query: 242 IGP 250
             P
Sbjct: 251 YEP 253


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 147 IPRPRNGSCSVVGLLRQSCTKHKQENSQEFITDH 46
           +  P    C   G    S T  +Q+N QEF+ D+
Sbjct: 33  VANPLKNRCLQFGTT--STTNTQQQNGQEFVDDY 64


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = -3

Query: 146 SHDPETGHVQSSVCLDNRALSTSKR-TPKSLLQIMLRCRCEC 24
           S DP    ++  VC+DN   S   R T    L  M +   EC
Sbjct: 379 SSDPSFEEMRKVVCVDNYRPSVQNRWTSDPFLASMSKLMREC 420


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,326
Number of Sequences: 2352
Number of extensions: 13333
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)