Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_N08
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 320 7e-88
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 316 6e-87
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 316 6e-87
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 315 1e-86
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 314 3e-86
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 314 3e-86
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 314 4e-86
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 313 8e-86
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 312 1e-85
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 152 2e-37
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 152 2e-37
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 150 9e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 150 9e-37
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 149 2e-36
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 147 5e-36
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 147 5e-36
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 131 5e-31
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 130 6e-31
At4g37190.1 68417.m05265 expressed protein 34 0.095
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.51
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 29 2.0
At5g24010.1 68418.m02821 protein kinase family protein contains ... 29 2.7
At4g22070.1 68417.m03192 WRKY family transcription factor identi... 29 2.7
At1g45201.2 68414.m05185 lipase class 3 family protein Since thi... 29 2.7
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 3.6
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 3.6
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 3.6
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 28 6.2
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 6.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.2
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 320 bits (785), Expect = 7e-88
Identities = 144/188 (76%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 269
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 270 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 449
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 450 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTV 629
VRKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 630 XXPYNATL 653
PYNATL
Sbjct: 181 VEPYNATL 188
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 316 bits (777), Expect = 6e-87
Identities = 143/187 (76%), Positives = 159/187 (85%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 453 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTVX 632
RKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 633 XPYNATL 653
PYNATL
Sbjct: 181 EPYNATL 187
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 316 bits (777), Expect = 6e-87
Identities = 145/188 (77%), Positives = 159/188 (84%), Gaps = 1/188 (0%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 269
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 270 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 449
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 450 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTV 629
VRKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 630 XXPYNATL 653
PYNATL
Sbjct: 181 VEPYNATL 188
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 315 bits (774), Expect = 1e-86
Identities = 145/187 (77%), Positives = 157/187 (83%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTVX 632
RKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 633 XPYNATL 653
PYNATL
Sbjct: 181 EPYNATL 187
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 314 bits (772), Expect = 3e-86
Identities = 143/187 (76%), Positives = 157/187 (83%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTVX 632
RKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 633 XPYNATL 653
PYNATL
Sbjct: 181 EPYNATL 187
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 314 bits (772), Expect = 3e-86
Identities = 143/187 (76%), Positives = 157/187 (83%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTVX 632
RKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 633 XPYNATL 653
PYNATL
Sbjct: 181 EPYNATL 187
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 314 bits (770), Expect = 4e-86
Identities = 145/187 (77%), Positives = 157/187 (83%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTVX 632
RKEAE+ DCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 633 XPYNATL 653
PYNATL
Sbjct: 181 EPYNATL 187
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 313 bits (768), Expect = 8e-86
Identities = 142/187 (75%), Positives = 158/187 (84%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTVX 632
RKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 633 XPYNATL 653
PYNATL
Sbjct: 181 EPYNATL 187
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 312 bits (766), Expect = 1e-85
Identities = 141/187 (75%), Positives = 157/187 (83%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDTVX 632
RKEAE+CDCLQGFQ KIRE+YPDR+M T+SV PSPKVSDTV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 633 XPYNATL 653
PYNATL
Sbjct: 181 EPYNATL 187
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 152 bits (369), Expect = 2e-37
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDT 626
VRK A++C LQGF ++ Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 181 VVEPYNSVL 189
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 152 bits (369), Expect = 2e-37
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDT 626
VRK A++C LQGF ++ Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 181 VVEPYNSVL 189
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (363), Expect = 9e-37
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDT 626
+RK A++C LQGF ++ Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 181 VVEPYNSVL 189
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 150 bits (363), Expect = 9e-37
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDT 626
+RK A++C LQGF ++ Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 181 VVEPYNSVL 189
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 149 bits (360), Expect = 2e-36
Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 447 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDT 626
+RK A++C LQGF ++ + + +++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 181 VVEPYNSVL 189
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 147 bits (357), Expect = 5e-36
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDT 626
+RK A++C LQGF ++ Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 181 VVEPYNSVL 189
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 147 bits (357), Expect = 5e-36
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSPKVSDT 626
+RK A++C LQGF ++ Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 181 VVEPYNSVL 189
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 131 bits (316), Expect = 5e-31
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Frame = +3
Query: 96 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 275
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 276 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 449
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 450 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSP-KVSDT 626
+ +EA+ D L+GF + ++Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 182 VVQPYNSLL 190
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 130 bits (315), Expect = 6e-31
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Frame = +3
Query: 96 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 275
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 276 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 449
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 450 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVPSP-KVSDT 626
+ +EA+ D L+GF + ++Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 627 VXXPYNATL 653
V PYN+ L
Sbjct: 182 VVQPYNSLL 190
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.095
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 260
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 261 GKYVPRAILVDLEP--GTMDS 317
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +3
Query: 426 LVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREQYPDRIMNTYSVVP 605
+++SV VVRKEAE+C+CLQ F RE D + Y V
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF--FVSGSFKVDSVEAKKKEENFRETLRDMANSKYEYVK 57
Query: 606 SPKVSDTVXXP 638
S ++ D V P
Sbjct: 58 SFELEDEVMLP 68
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 543 GGCPYRNRCRRRASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCS 406
G CP R R S G GG P+P RR KL P CS
Sbjct: 32 GSCPRRRIQERFKSEQGGGGGGGDDFPVPVTRR-KLRAEPNCPRCS 76
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 508 SECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQL 389
SE W P R+ S++ RTT +T S+S ++ A+L
Sbjct: 443 SESTGWTPLRRFRGSSNSRTTERTVSSSGYHTLRISFAEL 482
>At4g22070.1 68417.m03192 WRKY family transcription factor identical
to WRKY transcription factor 31 (WRKY31) GI:15990589
from [Arabidopsis thaliana]
Length = 538
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 543 GGCPYRN---RCRRRASVSVGIPGGNHTIPLP 457
GGCP R RC S+ + GNH PLP
Sbjct: 326 GGCPVRKQVQRCAEDRSILITTYEGNHNHPLP 357
>At1g45201.2 68414.m05185 lipase class 3 family protein Since this
genomic sequence region is unfinished, the annotated
gene may be missing a stop codon or start codon
Length = 479
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -3
Query: 579 FCQGTVL*FWR*GGCPYRNRCRRRASVSVGI--PGGNHTIPLPFERRLKLNRRAQHPPCS 406
F + +L FW+ G Y+ R VGI PGG++ P + +L + PP +
Sbjct: 412 FIRSFILQFWK--GDEYKENWLMRFVRVVGIVFPGGSNHFPFDYVNSTRLGGLVRPPPTT 469
Query: 405 VP 400
P
Sbjct: 470 TP 471
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 501 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 388
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 398 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 231
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 230 ALQLQVRVPMVGTG 189
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 398 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 231
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 230 ALQLQVRVPMVGTG 189
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.9 bits (59), Expect = 6.2
Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Frame = -2
Query: 490 NPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG------ 329
N R DSA+ ++S ++ S+ S + PAP P L ICP G
Sbjct: 98 NNLRPRSDSATTSSSSHSQPLLSSSSS----SATSPAPTSPANVLPTGNICPSGKIQITG 153
Query: 328 --PERTESMVPGSKSTRMARGTYLPPEASL*YTLMRSNCKSESPW*APVGSMPCSSEMIS 155
R+ S V GS + G+ + + S SP VGS SS ++
Sbjct: 154 MTQSRSRSDVLGSGTGTYGHGSIMRGGGISPAKPTNTGGGSNSP--VNVGSSSRSSSTVA 211
Query: 154 QNLAPIW 134
PIW
Sbjct: 212 TGETPIW 218
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 263 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 84
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 99 EIVHIQAGQCGNQIGAKFWEIISD 170
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,266,320
Number of Sequences: 28952
Number of extensions: 268302
Number of successful extensions: 805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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