Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_N02
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118357-1|AAM48386.1|  920|Drosophila melanogaster RE03056p pro...    29   5.5  
AE013599-1937|AAM68547.1|  920|Drosophila melanogaster CG30480-P...    29   5.5  

>AY118357-1|AAM48386.1|  920|Drosophila melanogaster RE03056p
           protein.
          Length = 920

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 458 LKEEALPTIEHQFHPLLDQQQSILXVQELLID-PXNSCYSTDYI 586
           +KE ALP I++ + P     ++I+   E++ D P  S  +TDY+
Sbjct: 607 IKESALPPIQNGYAPQAGVVETIVEEVEIVPDPPRQSIVTTDYM 650


>AE013599-1937|AAM68547.1|  920|Drosophila melanogaster CG30480-PA
           protein.
          Length = 920

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 458 LKEEALPTIEHQFHPLLDQQQSILXVQELLID-PXNSCYSTDYI 586
           +KE ALP I++ + P     ++I+   E++ D P  S  +TDY+
Sbjct: 607 IKESALPPIQNGYAPQAGVVETIVEEVEIVPDPPRQSIVTTDYM 650


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,824,731
Number of Sequences: 53049
Number of extensions: 366283
Number of successful extensions: 505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)