Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L21
(551 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 65 6e-12
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 6e-05
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 40 3e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.016
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.028
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.11
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.11
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.20
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.46
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.1
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 27 1.4
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 4.2
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 5.6
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 25 7.4
SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomy... 25 7.4
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 65.3 bits (152), Expect = 6e-12
Identities = 26/34 (76%), Positives = 32/34 (94%)
Frame = +1
Query: 346 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 447
G++S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 86 GVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 61.3 bits (142), Expect = 9e-11
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 171 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 347
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +3
Query: 171 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 347
FA + +GG + A S V ++ + L S + ++++ G+VD + + + G
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDG 190
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.9 bits (94), Expect = 6e-05
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +3
Query: 186 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 347
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +G
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREG 71
Score = 33.5 bits (73), Expect = 0.021
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 346 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGR 459
GL+ F+RGN N +R FP A+ FA + KQ L R
Sbjct: 71 GLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNR 108
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.5 bits (88), Expect = 3e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +3
Query: 177 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 332
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHI 69
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.016
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 159 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 257
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +3
Query: 183 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 278
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.028
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 183 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 347
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEG 82
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.1 bits (67), Expect = 0.11
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 162 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 341
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 342 QG 347
G
Sbjct: 164 YG 165
Score = 29.9 bits (64), Expect = 0.26
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 168 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 344
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 345 G 347
G
Sbjct: 70 G 70
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.1 bits (67), Expect = 0.11
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 186 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGSP 353
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G P
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIP 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.20
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 120 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 260
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.46
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 186 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 275
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 177 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 266
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 174 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQ 344
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQE 155
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 325 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 218
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 337 RSRGLLSFWRGNFANVIRYFPT 402
RS GL F+RG + V Y PT
Sbjct: 128 RSEGLKGFYRGYWMGVAIYLPT 149
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 491 RSNARTASSCQRPPRNTCLYLSLKAKLSAWV 399
R NA ++ + P++ C Y S KA L WV
Sbjct: 359 RRNALLLAADKHLPKSVCKYHSPKAGLFLWV 389
>SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1142
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 356 ERRPLLLGDAHEGVDDTLV 300
E+ LL+ D H G DDT+V
Sbjct: 724 EQNCLLIFDLHNGTDDTIV 742
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,030,694
Number of Sequences: 5004
Number of extensions: 35737
Number of successful extensions: 134
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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