Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L20
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical pr... 33 0.13
U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical pr... 32 0.41
U28730-4|AAO38621.1| 228|Caenorhabditis elegans Hypothetical pr... 30 1.2
U28730-3|AAO38622.1| 243|Caenorhabditis elegans Hypothetical pr... 30 1.2
DQ340628-1|ABC65816.1| 228|Caenorhabditis elegans chondroitin p... 30 1.2
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 29 2.2
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 29 2.2
U41109-11|AAB37037.2| 204|Caenorhabditis elegans Hypothetical p... 29 2.9
U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81038-6|CAB02756.1| 233|Caenorhabditis elegans Hypothetical pr... 27 8.8
U63636-1|AAC47433.1| 500|Caenorhabditis elegans RNA lariat debr... 27 8.8
DQ340627-1|ABC65815.1| 233|Caenorhabditis elegans chondroitin p... 27 8.8
AC006625-2|AAK68279.2| 500|Caenorhabditis elegans Lariat debran... 27 8.8
>Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical
protein ZK858.3 protein.
Length = 225
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIXKYS 610
CP ++R SCYF + KA C D+ + L V E+ + +KS+
Sbjct: 78 CPDGWLRYSDSCYFIETESLGFAKAERKCHDKQATLFVANSMEEWDAVRDHAEKSVLS-- 135
Query: 611 RWIG 622
WIG
Sbjct: 136 -WIG 138
>U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical
protein F47C12.2 protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2
Query: 413 TKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLT-VPARWEDKNLRNYLNK 589
T + CP +IR G CY + +W A+ C+ S L + E++ + + L+K
Sbjct: 42 TDVELTCPDDWIRHGTKCYLPFNIHQSWPFAMTTCQRYGSTLAKIQTGSENQFIASLLSK 101
Query: 590 --KSIXKYSRWIG 622
K WIG
Sbjct: 102 PGKPTEGKEYWIG 114
>U28730-4|AAO38621.1| 228|Caenorhabditis elegans Hypothetical
protein K10B2.3a protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIXKYS 610
CP +IR SCY+ + KA C ++ S L V ++ +K S +S
Sbjct: 81 CPEGWIRYSDSCYWVETELLGFAKAERKCSEKQSTLFVANSIDEWEAIRGHSKDS---FS 137
Query: 611 RWIG 622
WIG
Sbjct: 138 SWIG 141
>U28730-3|AAO38622.1| 243|Caenorhabditis elegans Hypothetical
protein K10B2.3b protein.
Length = 243
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIXKYS 610
CP +IR SCY+ + KA C ++ S L V ++ +K S +S
Sbjct: 81 CPEGWIRYSDSCYWVETELLGFAKAERKCSEKQSTLFVANSIDEWEAIRGHSKDS---FS 137
Query: 611 RWIG 622
WIG
Sbjct: 138 SWIG 141
>DQ340628-1|ABC65816.1| 228|Caenorhabditis elegans chondroitin
proteoglycan-6 protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIXKYS 610
CP +IR SCY+ + KA C ++ S L V ++ +K S +S
Sbjct: 81 CPEGWIRYSDSCYWVETELLGFAKAERKCSEKQSTLFVANSIDEWEAIRGHSKDS---FS 137
Query: 611 RWIG 622
WIG
Sbjct: 138 SWIG 141
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 407 NSTKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVP 547
+S + CP + I SCY F T W A C + +S T+P
Sbjct: 44 SSVPATATCPKNSIYYMGSCYVFDTTLRNWNDAALYCNNMNS-ATLP 89
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 407 NSTKMSYVCPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVP 547
+S + CP + I SCY F T W A C + +S T+P
Sbjct: 44 SSVPATATCPKNSIYYMGSCYVFDTTLRNWNDAALYCNNMNS-ATLP 89
>U41109-11|AAB37037.2| 204|Caenorhabditis elegans Hypothetical
protein F52E1.2 protein.
Length = 204
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNL-TVPARWEDKNLRNYLNKKSIXKY 607
CP + L CY D T+ A AC + + L T+ + E+ LR + ++
Sbjct: 66 CPTGWQYLNSKCYKKFDAAVTYAGATSACAAQGAELVTIDSFDENDALRKAFDTNALVDE 125
Query: 608 SR--WIGGIYDSGDKEW 652
++ WIG SG +W
Sbjct: 126 TKETWIGLKSLSGAWQW 142
>U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical
protein C25B8.4c protein.
Length = 145
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTV 544
CP ++R SCY+ + ++ +A C ++++ L V
Sbjct: 58 CPDGWVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFV 95
>U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical
protein C25B8.4b protein.
Length = 248
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTV 544
CP ++R SCY+ + ++ +A C ++++ L V
Sbjct: 94 CPDGWVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFV 131
>U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical
protein C25B8.4a protein.
Length = 212
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTV 544
CP ++R SCY+ + ++ +A C ++++ L V
Sbjct: 58 CPDGWVRFSDSCYWIEQHKQSFAEAEKRCYEKNATLFV 95
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 407 NSTKMSYVCPPSFIRLGH----SCYFFSDTEATWQKALFACKDRDS 532
N++ + CP + + GH SC+ F + T+ +A+ C++ D+
Sbjct: 2691 NTSLIEGDCPAGWFQAGHEEFKSCFLFVPSAVTFSRAVEYCEELDA 2736
>Z81038-6|CAB02756.1| 233|Caenorhabditis elegans Hypothetical
protein C25A1.8 protein.
Length = 233
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIXKYS 610
CP ++R SCY+ + KA C ++ S L V E+ + K++ +
Sbjct: 86 CPDGWLRFADSCYWIEKELLGFAKAERNCFEKQSTLFVANSIEEWDAIRVQAKEA---FF 142
Query: 611 RWIG 622
WIG
Sbjct: 143 SWIG 146
>U63636-1|AAC47433.1| 500|Caenorhabditis elegans RNA lariat
debranching enzyme protein.
Length = 500
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 614 WIGGIYDSGDKEW 652
W GGI D GDKEW
Sbjct: 224 WPGGIPDFGDKEW 236
>DQ340627-1|ABC65815.1| 233|Caenorhabditis elegans chondroitin
proteoglycan-5 protein.
Length = 233
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 431 CPPSFIRLGHSCYFFSDTEATWQKALFACKDRDSNLTVPARWEDKNLRNYLNKKSIXKYS 610
CP ++R SCY+ + KA C ++ S L V E+ + K++ +
Sbjct: 86 CPDGWLRFADSCYWIEKELLGFAKAERNCFEKQSTLFVANSIEEWDAIRVQAKEA---FF 142
Query: 611 RWIG 622
WIG
Sbjct: 143 SWIG 146
>AC006625-2|AAK68279.2| 500|Caenorhabditis elegans Lariat
debranching enzyme relatedprotein 1 protein.
Length = 500
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 614 WIGGIYDSGDKEW 652
W GGI D GDKEW
Sbjct: 224 WPGGIPDFGDKEW 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,246,206
Number of Sequences: 27780
Number of extensions: 274861
Number of successful extensions: 624
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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