Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L18
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   211   1e-56
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   6.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  211 bits (516), Expect = 1e-56
 Identities = 99/142 (69%), Positives = 121/142 (85%)
 Frame = +1

Query: 37  TKIIKXSGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 216
           +K+IK    E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 217 PKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVY 396
           PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VY
Sbjct: 65  PKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVY 124

Query: 397 NAILEDLVFPAEIVGKRIRVQV 462
           +AILEDLVFPAE+VGKRIRV++
Sbjct: 125 DAILEDLVFPAEVVGKRIRVKL 146



 Score = 60.9 bits (141), Expect = 3e-11
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +2

Query: 458 KLDGSQLIKVHLDKNQQTTIEHKVDTFQFCIQEANG 565
           KLDGSQLIKVHLDKNQQTTIEHKVDTF    ++  G
Sbjct: 145 KLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTG 180



 Score = 42.7 bits (96), Expect = 9e-06
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = +3

Query: 498 KTNRLLLNIKWTPSSSVYKKLTGREVTFEFPEPYL 602
           K  +  +  K    +SVYKKLTGR+VTFEFPE YL
Sbjct: 158 KNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 279 ELLFELTNKPDLDLLKGLQFRHRHIDDDR 193
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 167 KKLNYTIRSRSSSMCRCLN*RPFRRSRSGLFVSSKRS 277
           K L+ + RSRS S+ R ++    R SRS    S  RS
Sbjct: 411 KSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRS 447


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,874
Number of Sequences: 2352
Number of extensions: 12936
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)