Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L17
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.41 
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   2.9  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.9  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   8.9  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 135 GFLNTLFVMNTFKLC 91
           GF N LFV++TF +C
Sbjct: 233 GFQNFLFVLSTFSIC 247


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -1

Query: 430 HKIFLIVE*TDQHASPHARAALTAVILLTFSNIGPFYSVXRIG*ILSLPF 281
           HK+ L    +D+H     +A     IL +     P + + R   IL LP+
Sbjct: 75  HKLKLTNNISDKHGFLKEKAVDFLTILNSMHKYQPRFHLVRANDILKLPY 124


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 286 PFPPQPAFRAGRTIVFIRYRR 224
           PFPP   F  G + +   Y+R
Sbjct: 205 PFPPPYPFYPGTSAMLAAYQR 225


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 207 VIGCRLGFLNGDSVSMSQSELKSSGFLNTLF 115
           +I C  GF+  D+ +++QS + ++   NT F
Sbjct: 18  IISCPGGFVMEDANNLTQSTILTTCESNTDF 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,227
Number of Sequences: 336
Number of extensions: 2643
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)