Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L12
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNP8 Cluster: CG11115-PA; n=8; Endopterygota|Rep: CG1... 173 3e-42
UniRef50_Q6GR42 Cluster: MGC81060 protein; n=5; Deuterostomia|Re... 169 4e-41
UniRef50_Q13888 Cluster: TFIIH basal transcription factor comple... 168 1e-40
UniRef50_Q5BW88 Cluster: SJCHGC09266 protein; n=1; Schistosoma j... 151 1e-35
UniRef50_A6R9E3 Cluster: Suppressor of stem-loop protein 1; n=1;... 141 1e-32
UniRef50_Q2U9W3 Cluster: RNA polymerase II transcription initiat... 138 8e-32
UniRef50_Q55A38 Cluster: TFIIH subunit; n=2; Dictyostelium disco... 138 1e-31
UniRef50_Q04673 Cluster: Suppressor of stem-loop protein 1; n=5;... 137 2e-31
UniRef50_A7TJ61 Cluster: Putative uncharacterized protein; n=1; ... 136 3e-31
UniRef50_Q759D9 Cluster: ADR338Cp; n=2; Saccharomycetaceae|Rep: ... 129 5e-29
UniRef50_P34567 Cluster: Probable TFIIH basal transcription fact... 127 2e-28
UniRef50_Q4P3N2 Cluster: Putative uncharacterized protein; n=1; ... 127 3e-28
UniRef50_Q2GVU6 Cluster: Putative uncharacterized protein; n=3; ... 123 4e-27
UniRef50_Q0V439 Cluster: Putative uncharacterized protein; n=1; ... 121 1e-26
UniRef50_Q9ZVN9 Cluster: T7A14.8 protein; n=7; Magnoliophyta|Rep... 121 2e-26
UniRef50_O74995 Cluster: TFIIH basal transcription factor comple... 114 2e-24
UniRef50_Q017B7 Cluster: Basic transcription factor 2, 44kD subu... 108 1e-22
UniRef50_Q5KBR6 Cluster: RNA polymerase II transcription factor,... 105 7e-22
UniRef50_A5DUU6 Cluster: Suppressor of stem-loop protein 1; n=5;... 103 3e-21
UniRef50_Q872T8 Cluster: Related to transcription factor TFIIH c... 92 1e-17
UniRef50_A5JZD8 Cluster: Transcription factor, putative; n=6; Pl... 91 2e-17
UniRef50_Q4MZN6 Cluster: Putative uncharacterized protein; n=2; ... 90 4e-17
UniRef50_UPI0000498DEF Cluster: TFIIH basal transcription factor... 90 5e-17
UniRef50_A7AVF2 Cluster: Transcriptional factor 2 subunit; n=1; ... 90 5e-17
UniRef50_A2ENQ3 Cluster: Transcription factor ssl1 family protei... 80 5e-14
UniRef50_A1CZN1 Cluster: Transcription factor and DNA repair com... 79 9e-14
UniRef50_Q1JTF0 Cluster: Ssl1-like protein; n=1; Toxoplasma gond... 74 3e-12
UniRef50_Q5CUE9 Cluster: Transcription factor TFIIH with a vWA d... 69 1e-10
UniRef50_UPI00006CBD72 Cluster: transcription factor ssl1 family... 56 7e-07
UniRef50_A0DN89 Cluster: Chromosome undetermined scaffold_57, wh... 56 1e-06
UniRef50_A5C6U0 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A5CBQ1 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_Q4DY61 Cluster: DNA repair and transcription factor pro... 46 6e-04
UniRef50_Q4QAG3 Cluster: Putative uncharacterized protein; n=3; ... 43 0.007
UniRef50_UPI0001553420 Cluster: PREDICTED: hypothetical protein;... 33 7.8
UniRef50_UPI0000499B9D Cluster: proteasome regulatory subunit; n... 33 7.8
UniRef50_A1U210 Cluster: Von Willebrand factor, type A; n=3; Bac... 33 7.8
UniRef50_Q8N1G4 Cluster: Leucine-rich repeat-containing protein ... 33 7.8
>UniRef50_Q9VNP8 Cluster: CG11115-PA; n=8; Endopterygota|Rep:
CG11115-PA - Drosophila melanogaster (Fruit fly)
Length = 438
Score = 173 bits (421), Expect = 3e-42
Identities = 80/137 (58%), Positives = 102/137 (74%)
Frame = +2
Query: 239 RLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXX 418
RLGMMRH+ + +DCS +MS DLKP+R CT+KLL F+EEFFDQNP+SQLGLI +
Sbjct: 57 RLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKAKR 116
Query: 419 AXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFAS 598
A K+T+L+G R H+KA++ L+N LT EPSLQN L LA + L +P HASRE++++ S
Sbjct: 117 AEKVTELTGTSRVHLKALESLANVSLTSEPSLQNGLDLALKSLKVVPSHASREIVIIMGS 176
Query: 599 LTTCDPSDINTTIXTLK 649
LTTCDP DIN TI LK
Sbjct: 177 LTTCDPVDINLTIDELK 193
Score = 65.3 bits (152), Expect = 1e-09
Identities = 24/35 (68%), Positives = 32/35 (91%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
+++D KEYRWETGYEKTWEAIK+DEDG+++ +AE
Sbjct: 5 EQEDQKEYRWETGYEKTWEAIKDDEDGMLDGAIAE 39
>UniRef50_Q6GR42 Cluster: MGC81060 protein; n=5; Deuterostomia|Rep:
MGC81060 protein - Xenopus laevis (African clawed frog)
Length = 395
Score = 169 bits (412), Expect = 4e-41
Identities = 82/151 (54%), Positives = 107/151 (70%)
Frame = +2
Query: 197 KQHVKQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQN 376
K K++ +G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQN
Sbjct: 40 KDKRKRIFENRGQVRLGMMRHLYVIVDSSRTMEDQDLKPNRLTCTLKLLEFFVEEYFDQN 99
Query: 377 PLSQLGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPL 556
P+SQ+GLI N A K+T+L+GN R+HI A++ + +GEPSL N+L LA + L +
Sbjct: 100 PISQIGLIVTRNKRAEKLTELAGNPRQHINAMKKAVDMTCSGEPSLYNSLNLALQTLKHM 159
Query: 557 PGHASRELLVLFASLTTCDPSDINTTIXTLK 649
PGH SRE+LV+F+SLTTCDP++I I LK
Sbjct: 160 PGHTSREILVIFSSLTTCDPTNIYDMIKCLK 190
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ K RWE GYE+TWE +KEDE G +++ + E
Sbjct: 2 DEEPEKTKRWEGGYERTWEVLKEDESGSLKATIDE 36
>UniRef50_Q13888 Cluster: TFIIH basal transcription factor complex
p44 subunit; n=54; Eumetazoa|Rep: TFIIH basal
transcription factor complex p44 subunit - Homo sapiens
(Human)
Length = 395
Score = 168 bits (408), Expect = 1e-40
Identities = 80/147 (54%), Positives = 105/147 (71%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
+G+I + A K+T+LSGN RKHI +++ + GEPSL N+L +A + L +PGH
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHT 163
Query: 569 SRELLVLFASLTTCDPSDINTTIXTLK 649
SRE+L++F+SLTTCDPS+I I TLK
Sbjct: 164 SREVLIIFSSLTTCDPSNIYDLIKTLK 190
Score = 45.2 bits (102), Expect = 0.001
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>UniRef50_Q5BW88 Cluster: SJCHGC09266 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09266 protein - Schistosoma
japonicum (Blood fluke)
Length = 234
Score = 151 bits (367), Expect = 1e-35
Identities = 77/139 (55%), Positives = 96/139 (69%)
Frame = +2
Query: 230 GPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMN 409
G VRLGMMRHL L ID S AM+ QDLKP+R +CT+K FV E+FDQNP+SQLG+I +
Sbjct: 64 GFVRLGMMRHLFLIIDLSQAMNEQDLKPNRLICTIKAACTFVREYFDQNPISQLGIIVTS 123
Query: 410 NXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVL 589
+ A ++T+LSGN R H+ A+Q L + GEPSLQN L LA L H E++VL
Sbjct: 124 DRRAERLTELSGNPRPHLAALQSLYSRTCAGEPSLQNALLLAESRLKYTIHH--NEIVVL 181
Query: 590 FASLTTCDPSDINTTIXTL 646
ASLTTCDP DI+ TI +L
Sbjct: 182 IASLTTCDPGDIHQTIKSL 200
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/28 (67%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +1
Query: 97 KEYRWETGYEKTWEAIKEDEDG-LVESL 177
+E+RWE+GYEKTW AI+EDE G LV +L
Sbjct: 13 REFRWESGYEKTWNAIREDESGRLVTTL 40
>UniRef50_A6R9E3 Cluster: Suppressor of stem-loop protein 1; n=1;
Ajellomyces capsulatus NAm1|Rep: Suppressor of stem-loop
protein 1 - Ajellomyces capsulatus NAm1
Length = 506
Score = 141 bits (342), Expect = 1e-32
Identities = 68/146 (46%), Positives = 98/146 (67%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K+LL P++ G++RHL+L +D S AM+ +DL+P+R+L TL+ +FV EFF+QNP+SQ
Sbjct: 104 KRLLRDTTPLQRGIIRHLILVLDLSSAMAEKDLRPTRYLLTLRYAQEFVLEFFEQNPISQ 163
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
LG++ M + A +I+D+SGN HI AIQ L G PSLQN L +A L P H
Sbjct: 164 LGVLGMRDGLAVRISDMSGNPTDHIMAIQALRPKDPKGTPSLQNALEMARGALFHTPTHG 223
Query: 569 SRELLVLFASLTTCDPSDINTTIXTL 646
+RE+L++F +L + DP DI+ TI L
Sbjct: 224 TREVLIIFGALLSSDPGDIHQTITAL 249
>UniRef50_Q2U9W3 Cluster: RNA polymerase II transcription
initiation/nucleotide excision repair factor TFIIH; n=6;
Pezizomycotina|Rep: RNA polymerase II transcription
initiation/nucleotide excision repair factor TFIIH -
Aspergillus oryzae
Length = 458
Score = 138 bits (335), Expect = 8e-32
Identities = 66/146 (45%), Positives = 98/146 (67%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K+LL P++ G++RHL+L ID S +M+ +DL+P+R+L TL+ + V EFF+QNP+SQ
Sbjct: 76 KRLLKDTTPLQRGIIRHLILIIDLSQSMTEKDLRPTRYLLTLRYAQELVREFFEQNPISQ 135
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
LG++ + + A +I+DLSGN +HI AIQ L + G PSLQN + +A L P H
Sbjct: 136 LGVLGLRDGLAIRISDLSGNPTEHISAIQTLRDQDPKGLPSLQNGIEMARGALFHTPSHG 195
Query: 569 SRELLVLFASLTTCDPSDINTTIXTL 646
+RE+ ++F SL + DP DI+ TI L
Sbjct: 196 TREIFIIFGSLLSSDPGDIHQTIANL 221
>UniRef50_Q55A38 Cluster: TFIIH subunit; n=2; Dictyostelium
discoideum|Rep: TFIIH subunit - Dictyostelium discoideum
AX4
Length = 461
Score = 138 bits (333), Expect = 1e-31
Identities = 69/138 (50%), Positives = 96/138 (69%)
Frame = +2
Query: 236 VRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNX 415
VR GM RHL L +D S +S+QDLKPSR+ L+ + F++EFFDQNP+SQL +I N
Sbjct: 91 VRRGMQRHLCLILDLSKTLSNQDLKPSRYQVLLQNVELFIKEFFDQNPISQLSIIITKNS 150
Query: 416 XAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFA 595
A KI++LSGN +HI+A++ + GEPS+QN+L +A L +P + SRE+L +F+
Sbjct: 151 KAEKISELSGNRLRHIQAMK--DAIAMEGEPSIQNSLEVALSSLCYVPKYGSREVLFIFS 208
Query: 596 SLTTCDPSDINTTIXTLK 649
SLTTCDPS + TI +LK
Sbjct: 209 SLTTCDPSSLQKTIQSLK 226
Score = 41.5 bits (93), Expect = 0.017
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGL 165
DED +Y+WE +EKTW I EDE GL
Sbjct: 34 DEDGTNKYKWENRFEKTWLTIDEDEHGL 61
>UniRef50_Q04673 Cluster: Suppressor of stem-loop protein 1; n=5;
Saccharomycetales|Rep: Suppressor of stem-loop protein 1
- Saccharomyces cerevisiae (Baker's yeast)
Length = 461
Score = 137 bits (332), Expect = 2e-31
Identities = 62/138 (44%), Positives = 92/138 (66%)
Frame = +2
Query: 233 PVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNN 412
P + G++R L+L +DCS AM +DL+P+R ++ FV EFFDQNP+SQ+G+I M N
Sbjct: 117 PYQRGIIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRN 176
Query: 413 XXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLF 592
A ++ +SGN + HI A++ + G PSLQN L +A +L P+P H +RE+L++F
Sbjct: 177 GLAQLVSQVSGNPQDHIDALKSIRKQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVF 236
Query: 593 ASLTTCDPSDINTTIXTL 646
SL+T DP DI+ TI +L
Sbjct: 237 GSLSTTDPGDIHQTIDSL 254
>UniRef50_A7TJ61 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 497
Score = 136 bits (330), Expect = 3e-31
Identities = 60/138 (43%), Positives = 94/138 (68%)
Frame = +2
Query: 233 PVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNN 412
P + G++R L+L +DCS AM+ +DL+P+R + +++ F EFFDQNP+SQLG++ M N
Sbjct: 154 PYQRGIIRSLILVLDCSEAMAEKDLRPNRNVMSIQYAIDFTHEFFDQNPISQLGIVIMKN 213
Query: 413 XXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLF 592
A +T +SGN ++HI A++ + G PSLQN L +A +L P+P H +RE+L++F
Sbjct: 214 GLAQLLTPVSGNPQEHIDALKSIRRQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVF 273
Query: 593 ASLTTCDPSDINTTIXTL 646
L++ DP DI+ TI +L
Sbjct: 274 GGLSSTDPGDIHQTIQSL 291
>UniRef50_Q759D9 Cluster: ADR338Cp; n=2; Saccharomycetaceae|Rep:
ADR338Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 469
Score = 129 bits (312), Expect = 5e-29
Identities = 58/138 (42%), Positives = 92/138 (66%)
Frame = +2
Query: 233 PVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNN 412
P + G++R ++L IDCS AM +DL+P+R T++ FV FFDQNP+SQL ++ M N
Sbjct: 126 PYQRGIIRTMILVIDCSEAMLERDLRPNRHAMTVQYAIDFVHNFFDQNPISQLCIVAMRN 185
Query: 413 XXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLF 592
A ++ +SGN ++HI+A++ + G PSLQN L +A +L +P H +RE+L++F
Sbjct: 186 GMAQLVSQVSGNPQEHIEALKAVRKQEPKGNPSLQNALEMARGLLLHVPSHCTREVLIVF 245
Query: 593 ASLTTCDPSDINTTIXTL 646
+L++ DP DI+ TI +L
Sbjct: 246 GALSSTDPGDIHQTIASL 263
>UniRef50_P34567 Cluster: Probable TFIIH basal transcription factor
complex p44 subunit; n=2; Caenorhabditis|Rep: Probable
TFIIH basal transcription factor complex p44 subunit -
Caenorhabditis elegans
Length = 376
Score = 127 bits (307), Expect = 2e-28
Identities = 61/145 (42%), Positives = 99/145 (68%), Gaps = 2/145 (1%)
Frame = +2
Query: 221 LAKGP--VRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLG 394
L K P +RLG+MRH+++ IDCS M+S+ + PSRF+ +K L F++ FF+QNP++Q+G
Sbjct: 50 LTKRPERIRLGIMRHVMIVIDCSRFMTSKAMPPSRFVVVMKALQTFLDRFFEQNPIAQIG 109
Query: 395 LIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASR 574
LI + A ++T ++GN+R +++ L+ G+ SLQN L LA L +PGH SR
Sbjct: 110 LITCKDRKADRLTMMTGNIRVLKESLNTLTEAFCGGDFSLQNALQLACANLKGMPGHVSR 169
Query: 575 ELLVLFASLTTCDPSDINTTIXTLK 649
E++++ ++L+T DP +I +TI T+K
Sbjct: 170 EVVLVISALSTIDPGNIYSTIETMK 194
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTW---EAIKEDEDGLVESLVAEF 189
D+D+ K Y WE GY + + + EDE G +E +A++
Sbjct: 2 DDDEQKGYTWEAGYAEGLNINDVLVEDEGGSIEKSIAKY 40
>UniRef50_Q4P3N2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 539
Score = 127 bits (306), Expect = 3e-28
Identities = 62/146 (42%), Positives = 90/146 (61%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
+++L PV+ G++RHL+L ID S +M +D++P+RF TL+ +FV E+FDQNP+ Q
Sbjct: 132 RRVLKDVAPVQRGIIRHLVLLIDLSASMLEKDMRPNRFDVTLQYAREFVGEYFDQNPIGQ 191
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
L +I + A ++ + GN H ++ GEPSLQN L +A L LP
Sbjct: 192 LSIIGTRSGIAERLAMMGGNTVDHTASLSNKRRLEPRGEPSLQNALEMARSSLVHLPASN 251
Query: 569 SRELLVLFASLTTCDPSDINTTIXTL 646
SRE+L +F SLTTCDP +I+ TI TL
Sbjct: 252 SREILAIFGSLTTCDPGNIHDTIATL 277
Score = 36.3 bits (80), Expect = 0.64
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 103 YRWETGYEKTWEAIKEDEDGLVESLV 180
Y WE Y+++W+A+ ED+ G +ES V
Sbjct: 97 YSWEATYKRSWDAVAEDDSGSLESTV 122
>UniRef50_Q2GVU6 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 463
Score = 123 bits (296), Expect = 4e-27
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
++L+ P + G++RH++L +D S AM+ +DL P+R+L TL FV E+F+QNP+SQ
Sbjct: 87 RRLMRDTTPFQRGIIRHVMLVLDMSFAMAEKDLLPNRYLLTLNYAVDFVREYFEQNPISQ 146
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQ-GLSNTPLTGEPSLQNTLXLAGRILXPLPGH 565
LG++ M + A +I+D+ GN +HI+ ++ G PSLQN L + L P H
Sbjct: 147 LGIVGMRDGIAVRISDMGGNPAEHIEKLRVWAEQQEPQGNPSLQNALEMCRGALFHTPSH 206
Query: 566 ASRELLVLFASLTTCDPSDINTTIXTL 646
+RE+L+++ +L + DP DI+ TI L
Sbjct: 207 GTREILIIYGALLSSDPGDIHDTITNL 233
>UniRef50_Q0V439 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 492
Score = 121 bits (292), Expect = 1e-26
Identities = 56/147 (38%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K+L P + G++RH++L +D S AM +D++P+R++ + +V EFF+QNP+SQ
Sbjct: 88 KRLRKDTKPFQRGIIRHVVLVLDLSEAMMEKDMRPNRYITMINYAQDYVREFFEQNPISQ 147
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLT----GEPSLQNTLXLAGRILXPL 556
+ ++ M++ ++++LSGN +H+ AIQG+ + G PSLQN+L LA L
Sbjct: 148 MSVLGMHDGVCIRVSELSGNPAEHVAAIQGIRTSDNAKEPKGAPSLQNSLELARATLYHT 207
Query: 557 PGHASRELLVLFASLTTCDPSDINTTI 637
P H +RE++V+F SL + DP DI+ T+
Sbjct: 208 PSHGTREVIVVFGSLLSMDPGDIHQTV 234
>UniRef50_Q9ZVN9 Cluster: T7A14.8 protein; n=7; Magnoliophyta|Rep:
T7A14.8 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 421
Score = 121 bits (291), Expect = 2e-26
Identities = 59/138 (42%), Positives = 83/138 (60%)
Frame = +2
Query: 236 VRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNX 415
++ G++R+L + ID S A + D +PSR K + F+ EFFDQNPLSQ+GL+ + N
Sbjct: 76 IQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFFDQNPLSQIGLVSIKNG 135
Query: 416 XAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFA 595
A +TDL G+ HIKA+ G G+ SLQN L L L +P + RE+L+L++
Sbjct: 136 VAHTLTDLGGSPETHIKALMG--KLEALGDSSLQNALELVHEHLNQVPSYGHREVLILYS 193
Query: 596 SLTTCDPSDINTTIXTLK 649
+L TCDP DI TI K
Sbjct: 194 ALCTCDPGDIMETIQKCK 211
>UniRef50_O74995 Cluster: TFIIH basal transcription factor complex
p47 subunit; n=4; Ascomycota|Rep: TFIIH basal
transcription factor complex p47 subunit -
Schizosaccharomyces pombe (Fission yeast)
Length = 421
Score = 114 bits (274), Expect = 2e-24
Identities = 58/146 (39%), Positives = 90/146 (61%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K+LL P++ G++RH++L +D S +M +D RF +K +FV EFF+QNP+SQ
Sbjct: 72 KRLLRDTTPLQRGIIRHMVLVLDLSNSMEERDFHHKRFDLQIKYASEFVLEFFEQNPISQ 131
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
L +I + + A +ITDL GN + HI+ ++ L + +G SLQN L +A L + H
Sbjct: 132 LSIIGVMDGIAHRITDLHGNPQSHIQKLKSLRD--CSGNFSLQNALEMARASLSHIASHG 189
Query: 569 SRELLVLFASLTTCDPSDINTTIXTL 646
+RE+L++F S+ + DP DI TI L
Sbjct: 190 TREVLIIFGSILSSDPGDIFKTIDAL 215
Score = 35.5 bits (78), Expect = 1.1
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 88 DDPKEYRWETGYEKTWEAIKEDEDGLVESLVA 183
DD + Y WE Y+++W+ ++ED +G + ++A
Sbjct: 32 DDNEGYTWEGEYQRSWDIVQEDAEGSLVGVIA 63
>UniRef50_Q017B7 Cluster: Basic transcription factor 2, 44kD
subunit-related; n=2; Ostreococcus|Rep: Basic
transcription factor 2, 44kD subunit-related -
Ostreococcus tauri
Length = 414
Score = 108 bits (260), Expect = 1e-22
Identities = 56/141 (39%), Positives = 81/141 (57%)
Frame = +2
Query: 227 KGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXM 406
+G GMMR + +D S A + +D +P+R FV EFF+QNPLSQLG+I
Sbjct: 76 RGGAAKGMMRFAYVVVDLSRAANEEDFRPNRLSVVGHCAAAFVREFFNQNPLSQLGIIVA 135
Query: 407 NNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLV 586
N A ++T+LSG+ H A++ + +G+ SLQNTL A L +P + SRE+L
Sbjct: 136 RNGVAERLTELSGSPEAHCAALRNALDA--SGDFSLQNTLNAARTSLKSIPSYGSREVLY 193
Query: 587 LFASLTTCDPSDINTTIXTLK 649
+ +SL TCDP ++ T I K
Sbjct: 194 IMSSLATCDPGNVWTEIQATK 214
>UniRef50_Q5KBR6 Cluster: RNA polymerase II transcription factor,
putative; n=2; Filobasidiella neoformans|Rep: RNA
polymerase II transcription factor, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 460
Score = 105 bits (253), Expect = 7e-22
Identities = 51/136 (37%), Positives = 84/136 (61%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K+ L++ PVR ++RH+ + ID S +M +D +P+RF L L +V E+FDQNPL Q
Sbjct: 85 KRALMSDTPVRRSIIRHVFIIIDLSESMLDKDYRPTRFEVILGYLRTYVVEWFDQNPLGQ 144
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
+G+I M + + + + GN + ++A+ +GEPSLQN L +A + LP +
Sbjct: 145 IGVIAMRDRLSEVLIPMGGNPEEIVRALSDKRKLEPSGEPSLQNGLVMAKGGMAHLPSTS 204
Query: 569 SRELLVLFASLTTCDP 616
S E+LV+F++++T DP
Sbjct: 205 SLEILVIFSAISTADP 220
Score = 35.1 bits (77), Expect = 1.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 91 DPKEYRWETGYEKTWEAIKEDEDGLVESLV 180
D WE Y+K+W+ ++EDE G +ES V
Sbjct: 46 DTGRQAWEGEYQKSWDIVQEDESGSLESAV 75
>UniRef50_A5DUU6 Cluster: Suppressor of stem-loop protein 1; n=5;
Saccharomycetales|Rep: Suppressor of stem-loop protein 1
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 509
Score = 103 bits (248), Expect = 3e-21
Identities = 61/149 (40%), Positives = 92/149 (61%), Gaps = 11/149 (7%)
Frame = +2
Query: 233 PVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNN 412
P + G++R L++AID S AM+ +DL+P+R TL L +FV EFFDQNP+SQ+G++ M N
Sbjct: 103 PYQRGIIRTLVIAIDGSQAMAEKDLRPTRLSMTLNYLQEFVVEFFDQNPISQIGIVLMRN 162
Query: 413 XXAXKITDLSGNVRKHIKAIQGL-----SNTPLTGEPSLQNTLXLAGRILXPLPGHA--- 568
A ++++SG + HI ++ L + G+PSLQNTL +A +L G +
Sbjct: 163 GVANLVSEVSGLPQYHIDKLRQLKARQHNKFEPKGDPSLQNTLEMARSLLKFNFGTSSNN 222
Query: 569 ---SRELLVLFASLTTCDPSDINTTIXTL 646
S+E+LV+ SL T DP +I+ TI L
Sbjct: 223 TKNSKEILVVLGSLFTSDPGNIHKTIEGL 251
>UniRef50_Q872T8 Cluster: Related to transcription factor TFIIH
chain p47; n=1; Neurospora crassa|Rep: Related to
transcription factor TFIIH chain p47 - Neurospora crassa
Length = 416
Score = 91.9 bits (218), Expect = 1e-17
Identities = 53/146 (36%), Positives = 84/146 (57%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
++LL P++ G++RHL+L +D S AM+ +DL P+R+ L FV E+F+QNP+SQ
Sbjct: 63 RRLLRDTTPLQRGIIRHLMLVLDMSFAMADKDLLPNRYRVVLNNAIGFVREYFEQNPISQ 122
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
LG++ M + A +I+DLSGN +HI+ + TP HA
Sbjct: 123 LGIVGMRDGIAVRISDLSGNPAEHIE-----NQTP----------------------SHA 155
Query: 569 SRELLVLFASLTTCDPSDINTTIXTL 646
+RE+L+++ +L + DP DI+ TI L
Sbjct: 156 TREILIIYGALVSIDPGDIHDTINDL 181
>UniRef50_A5JZD8 Cluster: Transcription factor, putative; n=6;
Plasmodium|Rep: Transcription factor, putative -
Plasmodium vivax
Length = 401
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/130 (31%), Positives = 73/130 (56%)
Frame = +2
Query: 236 VRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNX 415
+R G+ RH+++ D S +M +D KP R L+ + F+ FF +NP+ +G++ + N
Sbjct: 78 LRKGIFRHIIILFDMSSSMKERDFKPDRINVVLECVENFLTHFFFKNPVGHVGVVALKNS 137
Query: 416 XAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFA 595
A I L+ N+ A+ + L G PSLQ L +A +L +P + ++E+L+++
Sbjct: 138 SAKLIQPLTSNMEDITNALLKERSMGLQGSPSLQQGLEIAHDLLIDIPLYGTKEILIMYG 197
Query: 596 SLTTCDPSDI 625
S+ TCD +I
Sbjct: 198 SIRTCDKKNI 207
>UniRef50_Q4MZN6 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 447
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/135 (31%), Positives = 71/135 (52%)
Frame = +2
Query: 245 GMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXAX 424
G++R +++ D S M D KP R C L +F+ E + P++Q+G++ M N
Sbjct: 88 GIIRSIMILFDMSEQMHEMDFKPDRLYCAFNSLKEFLGELYSSGPITQVGIVVMRNKICN 147
Query: 425 KITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFASLT 604
IT N + ++ + + G SLQN L + +I+ LP +++RE+LV+F S
Sbjct: 148 VITQFGTNPNEQMELLSSVLKDGPEGSSSLQNGLEMCMKIMCDLPYYSTREILVIFGSNR 207
Query: 605 TCDPSDINTTIXTLK 649
T DP +I T+ LK
Sbjct: 208 TLDPGNILLTLDQLK 222
>UniRef50_UPI0000498DEF Cluster: TFIIH basal transcription factor
complex subunit; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: TFIIH basal transcription factor complex
subunit - Entamoeba histolytica HM-1:IMSS
Length = 363
Score = 89.8 bits (213), Expect = 5e-17
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Frame = +2
Query: 239 RLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXX 418
R G+ R ++ ID S +M+ +D +P+R L +F EEF+ NPLS++GLI N
Sbjct: 33 RRGLQRKVIFIIDMSLSMNQEDYQPNRITFIQTKLKEFFEEFYIDNPLSEIGLICTRNKT 92
Query: 419 AXKITDLSGN--VRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLF 592
A + LS N ++K +K N G+ SLQ +L LA +IL +SRE++++
Sbjct: 93 AEQQFPLSRNLIIQKEMK----WGN--CEGQMSLQISLDLAQQILSTTSNSSSREIIIVT 146
Query: 593 ASLTTCDPSDINTTIXTLK 649
+S+TTCDP +I TI TLK
Sbjct: 147 SSITTCDPGNIYDTIETLK 165
>UniRef50_A7AVF2 Cluster: Transcriptional factor 2 subunit; n=1;
Babesia bovis|Rep: Transcriptional factor 2 subunit -
Babesia bovis
Length = 364
Score = 89.8 bits (213), Expect = 5e-17
Identities = 45/135 (33%), Positives = 71/135 (52%)
Frame = +2
Query: 245 GMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXAX 424
G++R++++ D S M D KP R C + ++ F Q P++QL +I M N +
Sbjct: 89 GVVRNIVIMFDTSDGMREVDFKPDRLHCAAGAVKGLIQGLFHQGPMTQLAIITMRNKRST 148
Query: 425 KITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFASLT 604
++ L +HI + G PSLQN L +A IL +P + +RE+LV+F +
Sbjct: 149 MVSKLGTPPSEHIALLDEKIKEGTDGVPSLQNGLEMAISILTDMPPYTTREILVIFGATK 208
Query: 605 TCDPSDINTTIXTLK 649
T DP +I TT+ LK
Sbjct: 209 TFDPGNILTTLQKLK 223
>UniRef50_A2ENQ3 Cluster: Transcription factor ssl1 family protein;
n=2; Trichomonas vaginalis G3|Rep: Transcription factor
ssl1 family protein - Trichomonas vaginalis G3
Length = 394
Score = 79.8 bits (188), Expect = 5e-14
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Frame = +2
Query: 245 GMMRHLLLAIDCSX-AMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXA 421
G++R L+L +D S + + +R F+ +FF QNPLSQL ++
Sbjct: 57 GLIRSLVLILDLSTNGLEMRLFNQNRMKLIQDQTIDFINDFFVQNPLSQLSILATYESTC 116
Query: 422 XKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRIL---XPLPGHA----SREL 580
+T LS NV+ H+K I+ LS GEPSL+++L +A IL PG A ++E+
Sbjct: 117 RILTPLSCNVQDHVKKIKSLSLEDHGGEPSLESSLSIATAILGNGEKNPGLAQISTTKEV 176
Query: 581 LVLFASLTTCDPSDINTTIXTLK 649
L+++ SLTTCD S I T+ ++
Sbjct: 177 LIVYGSLTTCDNSPIYKTLNLVR 199
>UniRef50_A1CZN1 Cluster: Transcription factor and DNA repair
complex, core TFIIH, putative; n=1; Neosartorya fischeri
NRRL 181|Rep: Transcription factor and DNA repair
complex, core TFIIH, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 157
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/76 (46%), Positives = 54/76 (71%)
Frame = +2
Query: 308 KPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSN 487
+P+R+L +L+ +FV EFF+QNP+SQLG++ + + A +++D+SGN +HI AIQ L +
Sbjct: 77 RPTRYLLSLRYAQEFVREFFEQNPISQLGVLGLRDGLAIRVSDMSGNPTEHISAIQALRD 136
Query: 488 TPLTGEPSLQNTLXLA 535
G PSLQN L +A
Sbjct: 137 HDPKGLPSLQNGLEMA 152
>UniRef50_Q1JTF0 Cluster: Ssl1-like protein; n=1; Toxoplasma gondii
RH|Rep: Ssl1-like protein - Toxoplasma gondii RH
Length = 647
Score = 73.7 bits (173), Expect = 3e-12
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 25/163 (15%)
Frame = +2
Query: 236 VRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNX 415
++ G++R L+L ID S AM +D +P R C +L +F+ F QNPL+QL + +
Sbjct: 269 IKKGIIRSLVLLIDMSEAMREKDFRPDRLRCVCQLAEEFIGTFLLQNPLAQLAQVALIGP 328
Query: 416 XAXKITD-----------------------LSGNVRKHIKAIQGLSNTP--LTGEPSLQN 520
A + S + + I A++ P TG PSL N
Sbjct: 329 SAEPLAARGEAARDSAAVSARPSGSASMQLFSSSASESIAALREKRKHPGVGTGVPSLNN 388
Query: 521 TLXLAGRILXPLPGHASRELLVLFASLTTCDPSDINTTIXTLK 649
L LA +L +P + +RE+LVLF SL TCD I TI +K
Sbjct: 389 GLHLAKDLLAGVPPYCTREVLVLFGSLRTCDVGCIEETIAAVK 431
>UniRef50_Q5CUE9 Cluster: Transcription factor TFIIH with a vWA
domain; n=2; Cryptosporidium|Rep: Transcription factor
TFIIH with a vWA domain - Cryptosporidium parvum Iowa II
Length = 423
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Frame = +2
Query: 218 LLAKGP---VRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
LL +GP +R G++R++++ +D + M D KP R C +K F+++ + NPL+Q
Sbjct: 64 LLKRGPNTNIRRGLLRNIVIILDMTSNMLELDYKPDRLQCMVKCNEIFIKQLLEDNPLTQ 123
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
+ +I + + I + N + + +I G S+QN L A +L +P +
Sbjct: 124 ISVISIYDGIGEVIISYNSNFLEIMTSILNYLKKGCKGSMSIQNGLEKAKYLLVSIPPYG 183
Query: 569 SRELLVLFASLTTCDPS 619
++E++ S+ + D S
Sbjct: 184 TKEIIFFLGSMRSVDNS 200
>UniRef50_UPI00006CBD72 Cluster: transcription factor ssl1 family
protein; n=1; Tetrahymena thermophila SB210|Rep:
transcription factor ssl1 family protein - Tetrahymena
thermophila SB210
Length = 372
Score = 56.0 bits (129), Expect = 7e-07
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = +2
Query: 248 MMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXAXK 427
++R + + +D + + + D KPSR T L F++ FFD NPLS L + N
Sbjct: 46 LLRFVYIIVDTTQSSTRVDFKPSRIGLTQIYLKNFIKNFFDSNPLSVLSIGKTQNGQCIT 105
Query: 428 ITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFASLTT 607
+ + + ++ K I+ L + SL L I P +A RE++++ ++ +T
Sbjct: 106 LQEFTSSISLLDKTIEKLV-VDEKEDFSLFECLNETFNIFAEAPPYAFREVVLIQSTPST 164
Query: 608 CDPSDINTTIXTLK 649
D DIN I K
Sbjct: 165 KDKGDINEQINKAK 178
>UniRef50_A0DN89 Cluster: Chromosome undetermined scaffold_57, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_57,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 373
Score = 55.6 bits (128), Expect = 1e-06
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Frame = +2
Query: 197 KQHVKQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLL----------X 346
K+ Q L+A+ P+ +MR+LL+ ID + + D KPSR L+ L
Sbjct: 37 KESDAQFLIAQNPL---IMRNLLIIIDTTKSSKVSDFKPSRLAVALQFLPVKKHTIIHNQ 93
Query: 347 KFVEEFFDQNPLSQLGLIXMNNXXAXKITDLSG---NVRKHIKAIQGLSNTPLTGEPSLQ 517
F+E+F + NPLSQ+G+ I D + N+++++ I ++ + LQ
Sbjct: 94 SFIEQFLEGNPLSQIGIAVAEEYKCKTILDFTSSCVNIKQYLSTIHSINEAGFSMAACLQ 153
Query: 518 NTLXLAGRILXPLPGHASRELLVLFASLTTCDPSDIN 628
L + HA +L + S + D D+N
Sbjct: 154 TAL----HVFSSTQLHAQSSILFVTTSTYSDDKLDLN 186
>UniRef50_A5C6U0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 328
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +2
Query: 434 DLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLFASLTTCD 613
DL G++ H+KA+ G +G+ SLQN L L L +P + RE+L+L+++L+ CD
Sbjct: 116 DLGGSIDSHVKALMG--KLECSGDSSLQNALNLVRGYLNLIPSYGYREVLILYSALSACD 173
Query: 614 PSDINTTI 637
DI T+
Sbjct: 174 TGDIIPTL 181
>UniRef50_A5CBQ1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 578
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +2
Query: 356 EEFFDQNPLSQLGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPS 511
+EFFDQ+P SQ+GL+ + + A +TDL G+ H+KA+ S+ P P+
Sbjct: 199 KEFFDQDPFSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMA-SDIPSISSPN 249
>UniRef50_Q4DY61 Cluster: DNA repair and transcription factor
protein, putative; n=2; Trypanosoma|Rep: DNA repair and
transcription factor protein, putative - Trypanosoma
cruzi
Length = 356
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 251 MRHLLLAIDCSXAM-SSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXAXK 427
M +L +D S AM SS D P+R L L +FV + D NPL+ LG++ M + A +
Sbjct: 1 MLKTVLLLDGSEAMNSSADYLPTRLLALRPQLGRFVHAYLDANPLASLGVVTMRDGVAHR 60
Query: 428 ITDLSGNVRKHIKAIQ 475
+ + N I+ ++
Sbjct: 61 LNSCTTNASDIIQTLE 76
>UniRef50_Q4QAG3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 446
Score = 42.7 bits (96), Expect = 0.007
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +2
Query: 248 MMRHLLLAIDCSXAM-SSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXAX 424
M+R +LL +D S AM SS D P+ L L +FVE + D PL+ LG++ M + +
Sbjct: 1 MLRTVLL-LDGSDAMNSSSDYLPNYLLAMRPPLLRFVERYLDSTPLASLGVVVMRDGISH 59
Query: 425 KITDLSGNVRKHIKAIQ-GLSNTPLTGEPSLQNTLXLA 535
++ + N + + ++ + +G S++N L +A
Sbjct: 60 RLLPCTTNRNEIVDVLERDVFLHGGSGNTSMENGLRMA 97
>UniRef50_UPI0001553420 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 426
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 327 HRNREGFKSWELIASEQSMAKSKCLIMPSLTGPLARSSCFT 205
H N+EG +SW + + S C MP L P R C T
Sbjct: 257 HFNKEGSQSWYWVERRAAFFTSSCKPMPPLPFPPRRPGCHT 297
>UniRef50_UPI0000499B9D Cluster: proteasome regulatory subunit; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 302
Score = 32.7 bits (71), Expect = 7.8
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 1/130 (0%)
Frame = +2
Query: 263 LLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLGLIXMNNXXAXKITDLS 442
++ ID S M + D PSR ++ + +NP + +G I + + L+
Sbjct: 6 IIIIDTSDYMRNGDYTPSRMEAQIEAVQAITSGRLRKNPENHVGFIAAGSESKRILVTLT 65
Query: 443 GNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASRELLVLF-ASLTTCDPS 619
G+ K + GL + G + L +A L + ++LF S +
Sbjct: 66 GDFG---KILSGLHEAKIGGSSDFKQALLVAKLALANRVDKIYTQRIILFVGSPLNINSD 122
Query: 620 DINTTIXTLK 649
+ T + LK
Sbjct: 123 EAQTMVNLLK 132
>UniRef50_A1U210 Cluster: Von Willebrand factor, type A; n=3;
Bacteria|Rep: Von Willebrand factor, type A -
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 339
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 RHLLLAIDCSXAMSSQDLK-PSRFLCTLKLLXKFVEEFFDQNPLSQLGLI 400
R L+L +D S +M QD+ R + L+ + + +++F DQ +LGLI
Sbjct: 89 RDLMLVVDISPSMDEQDMVLQGRSINRLQAVKRVLDDFIDQREGDRLGLI 138
>UniRef50_Q8N1G4 Cluster: Leucine-rich repeat-containing protein 47;
n=22; Euteleostomi|Rep: Leucine-rich repeat-containing
protein 47 - Homo sapiens (Human)
Length = 583
Score = 32.7 bits (71), Expect = 7.8
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 419 AXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASR 574
A ++ DLSGN + + QGL G P LQ +L L+G L LP +R
Sbjct: 100 ALRVLDLSGNALEALPPGQGLGPAEPPGLPQLQ-SLNLSGNRLRELPADLAR 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,411,105
Number of Sequences: 1657284
Number of extensions: 8339503
Number of successful extensions: 20256
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 19795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20243
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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