Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L12
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 542 FAQPAXAYFVMMALQSAECWINLVWL 465
           F  P    F+   L     WI LVWL
Sbjct: 200 FFVPPPLMFLQDFLSHQHAWIWLVWL 225


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 542 FAQPAXAYFVMMALQSAECWINLVWL 465
           F  P    F+   L     WI LVWL
Sbjct: 433 FFVPPPLMFLQDFLSHQHAWIWLVWL 458


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 542 FAQPAXAYFVMMALQSAECWINLVWL 465
           F  P    F+   L     WI LVWL
Sbjct: 433 FFVPPPLMFLQDFLSHQHAWIWLVWL 458


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +1

Query: 85  EDDPKEYRWETGYE---KTWEAIKEDED 159
           +D PK  +WE G E   +  + ++ DED
Sbjct: 6   QDCPKRMKWEGGEEGSPEEGDKLEGDED 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,124
Number of Sequences: 336
Number of extensions: 2192
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)