Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L12
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30094-1|CAA82910.1| 395|Homo sapiens basic transcripion factor... 168 2e-41
BC105980-1|AAI05981.1| 395|Homo sapiens DKFZP686P18101 protein ... 168 2e-41
BC065021-1|AAH65021.1| 395|Homo sapiens general transcription f... 168 2e-41
BC064557-1|AAH64557.1| 395|Homo sapiens LOC730394 protein protein. 168 2e-41
BT006773-1|AAP35419.1| 165|Homo sapiens general transcription f... 122 8e-28
BC005345-1|AAH05345.1| 165|Homo sapiens GTF2H2 protein protein. 122 8e-28
U21911-1|AAA64502.1| 130|Homo sapiens BTF2p44 protein. 104 2e-22
BC031301-1|AAH31301.1| 583|Homo sapiens leucine rich repeat con... 33 1.2
AL365330-3|CAI42528.1| 583|Homo sapiens leucine rich repeat con... 33 1.2
>Z30094-1|CAA82910.1| 395|Homo sapiens basic transcripion factor 2,
44 kD subunit protein.
Length = 395
Score = 168 bits (408), Expect = 2e-41
Identities = 80/147 (54%), Positives = 105/147 (71%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
+G+I + A K+T+LSGN RKHI +++ + GEPSL N+L +A + L +PGH
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHT 163
Query: 569 SRELLVLFASLTTCDPSDINTTIXTLK 649
SRE+L++F+SLTTCDPS+I I TLK
Sbjct: 164 SREVLIIFSSLTTCDPSNIYDLIKTLK 190
Score = 45.2 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>BC105980-1|AAI05981.1| 395|Homo sapiens DKFZP686P18101 protein
protein.
Length = 395
Score = 168 bits (408), Expect = 2e-41
Identities = 80/147 (54%), Positives = 105/147 (71%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
+G+I + A K+T+LSGN RKHI +++ + GEPSL N+L +A + L +PGH
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKHITSLKEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHT 163
Query: 569 SRELLVLFASLTTCDPSDINTTIXTLK 649
SRE+L++F+SLTTCDPS+I I TLK
Sbjct: 164 SREVLIIFSSLTTCDPSNIYDLIKTLK 190
Score = 45.2 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>BC065021-1|AAH65021.1| 395|Homo sapiens general transcription
factor IIH, polypeptide 2, 44kDa-like protein.
Length = 395
Score = 168 bits (408), Expect = 2e-41
Identities = 80/147 (54%), Positives = 105/147 (71%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
+G+I + A K+T+LSGN RKHI +++ + GEPSL N+L +A + L +PGH
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKHITSLKEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHT 163
Query: 569 SRELLVLFASLTTCDPSDINTTIXTLK 649
SRE+L++F+SLTTCDPS+I I TLK
Sbjct: 164 SREVLIIFSSLTTCDPSNIYDLIKTLK 190
Score = 45.2 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>BC064557-1|AAH64557.1| 395|Homo sapiens LOC730394 protein protein.
Length = 395
Score = 168 bits (408), Expect = 2e-41
Identities = 80/147 (54%), Positives = 105/147 (71%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHA 568
+G+I + A K+T+LSGN RKHI +++ + GEPSL N+L +A + L +PGH
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKHITSLKEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHT 163
Query: 569 SRELLVLFASLTTCDPSDINTTIXTLK 649
SRE+L++F+SLTTCDPS+I I TLK
Sbjct: 164 SREVLIIFSSLTTCDPSNIYDLIKTLK 190
Score = 45.2 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>BT006773-1|AAP35419.1| 165|Homo sapiens general transcription
factor IIH, polypeptide 2, 44kDa protein.
Length = 165
Score = 122 bits (295), Expect = 8e-28
Identities = 59/113 (52%), Positives = 78/113 (69%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRIL 547
+G+I + A K+T+LSGN RKHI +++ + GEPSL N+L +A + L
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTL 156
Score = 45.2 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>BC005345-1|AAH05345.1| 165|Homo sapiens GTF2H2 protein protein.
Length = 165
Score = 122 bits (295), Expect = 8e-28
Identities = 59/113 (52%), Positives = 78/113 (69%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRIL 547
+G+I + A K+T+LSGN RKHI +++ + GEPSL N+L +A + L
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTL 156
Score = 45.2 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>U21911-1|AAA64502.1| 130|Homo sapiens BTF2p44 protein.
Length = 130
Score = 104 bits (250), Expect = 2e-22
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = +2
Query: 209 KQLLLAKGPVRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQ 388
K++ G VRLGMMRHL + +D S M QDLKP+R CTLKLL FVEE+FDQNP+SQ
Sbjct: 44 KRVFEHHGQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQ 103
Query: 389 LGLIXMNNXXAXKITDLSGNVRKHIKA 469
+G+I + A K+T+LSGN RK I +
Sbjct: 104 IGIIVTKSKRAEKLTELSGNPRKXISS 130
Score = 45.2 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 82 DEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAE 186
DE+ + RWE GYE+TWE +KEDE G +++ + +
Sbjct: 2 DEEPERTKRWEGGYERTWEILKEDESGSLKATIED 36
>BC031301-1|AAH31301.1| 583|Homo sapiens leucine rich repeat
containing 47 protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 419 AXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASR 574
A ++ DLSGN + + QGL G P LQ +L L+G L LP +R
Sbjct: 100 ALRVLDLSGNALEALPPGQGLGPAEPPGLPQLQ-SLNLSGNRLRELPADLAR 150
>AL365330-3|CAI42528.1| 583|Homo sapiens leucine rich repeat
containing 47 protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 419 AXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASR 574
A ++ DLSGN + + QGL G P LQ +L L+G L LP +R
Sbjct: 100 ALRVLDLSGNALEALPPGQGLGPAEPPGLPQLQ-SLNLSGNRLRELPADLAR 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,086,386
Number of Sequences: 237096
Number of extensions: 1346571
Number of successful extensions: 2299
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2299
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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