Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L12
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30662-4|CAA83139.3|  376|Caenorhabditis elegans Hypothetical pr...   127   8e-30
Z68295-1|CAA92587.1|  325|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z30662-4|CAA83139.3|  376|Caenorhabditis elegans Hypothetical
           protein T16H12.4 protein.
          Length = 376

 Score =  127 bits (306), Expect = 8e-30
 Identities = 61/145 (42%), Positives = 99/145 (68%), Gaps = 2/145 (1%)
 Frame = +2

Query: 221 LAKGP--VRLGMMRHLLLAIDCSXAMSSQDLKPSRFLCTLKLLXKFVEEFFDQNPLSQLG 394
           L K P  +RLG+MRH+++ IDCS  M+S+ + PSRF+  +K L  F++ FF+QNP++Q+G
Sbjct: 50  LTKRPERIRLGIMRHVMIVIDCSRFMTSKAMPPSRFVVVMKALQTFLDRFFEQNPIAQIG 109

Query: 395 LIXMNNXXAXKITDLSGNVRKHIKAIQGLSNTPLTGEPSLQNTLXLAGRILXPLPGHASR 574
           LI   +  A ++T ++GN+R   +++  L+     G+ SLQN L LA   L  +PGH SR
Sbjct: 110 LITCKDRKADRLTMMTGNIRVLKESLNTLTEAFCGGDFSLQNALQLACANLKGMPGHVSR 169

Query: 575 ELLVLFASLTTCDPSDINTTIXTLK 649
           E++++ ++L+T DP +I +TI T+K
Sbjct: 170 EVVLVISALSTIDPGNIYSTIETMK 194



 Score = 33.1 bits (72), Expect = 0.18
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +1

Query: 82  DEDDPKEYRWETGYEKTW---EAIKEDEDGLVESLVAEF 189
           D+D+ K Y WE GY +     + + EDE G +E  +A++
Sbjct: 2   DDDEQKGYTWEAGYAEGLNINDVLVEDEGGSIEKSIAKY 40


>Z68295-1|CAA92587.1|  325|Caenorhabditis elegans Hypothetical
           protein C07C7.1 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 91  HLHQPLLIIY*NLKFKINFYLHL 23
           HLH P   I+ N+ F  NF++HL
Sbjct: 47  HLHIPPATIFLNVSFISNFWIHL 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,930,785
Number of Sequences: 27780
Number of extensions: 199827
Number of successful extensions: 464
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)