Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L10
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    27   0.10 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.7  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -3

Query: 562 FLLIFLFKVPSCFFIKFFQL 503
           +LLIF+ ++P CFF++  +L
Sbjct: 180 YLLIFVQQIPFCFFVRVIRL 199


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/60 (23%), Positives = 26/60 (43%)
 Frame = +2

Query: 374 IDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKKTAWYFEXKY 553
           I+L K   S  D++K     A      ++L H   +L+Y  S + E        +F+ ++
Sbjct: 128 INLLKHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVYSSKCENNSTGVEHFFKKQF 187


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -3

Query: 595 SCLFEEVICRGFLLIFLFKVPSCFFIKFFQ 506
           S +FE  + + F ++ +    + F + +FQ
Sbjct: 114 SVIFERKVMKNFAILIIPTCVAMFIVPYFQ 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,833
Number of Sequences: 336
Number of extensions: 2925
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)