Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L08
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole... 237 2e-61
UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase su... 236 4e-61
UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase sm... 180 4e-44
UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,... 164 2e-39
UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Re... 163 3e-39
UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1; ... 154 2e-36
UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase sm... 143 3e-33
UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot syn... 137 2e-31
UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase sm... 130 3e-29
UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase sm... 124 2e-27
UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1; ... 118 9e-26
UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1; ... 109 6e-23
UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-1... 108 1e-22
UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;... 108 1e-22
UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole... 96 6e-19
UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase sm... 89 1e-16
UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;... 85 2e-15
UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase be... 81 2e-14
UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;... 80 5e-14
UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;... 74 3e-12
UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n... 72 1e-11
UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2... 72 1e-11
UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep: ... 68 2e-10
UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n... 60 5e-08
UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase be... 60 6e-08
UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3 protein/Ri... 58 2e-07
UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa... 57 4e-07
UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent viru... 56 6e-07
UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase be... 56 6e-07
UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase be... 56 7e-07
UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n... 54 2e-06
UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, b... 54 4e-06
UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase su... 53 7e-06
UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, b... 52 9e-06
UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;... 50 5e-05
UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;... 50 5e-05
UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;... 50 5e-05
UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase su... 50 5e-05
UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4; ... 49 8e-05
UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase be... 48 1e-04
UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, b... 46 8e-04
UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1 ... 46 8e-04
UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase su... 46 0.001
UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep: Lm... 44 0.002
UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage phiKZ|... 44 0.002
UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;... 44 0.004
UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase be... 44 0.004
UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2; Lymphocy... 43 0.006
UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase su... 43 0.007
UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep: Slr... 42 0.010
UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;... 42 0.017
UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase be... 42 0.017
UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, b... 41 0.022
UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase be... 41 0.022
UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase sm... 41 0.030
UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase su... 40 0.052
UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, b... 39 0.090
UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|R... 39 0.12
UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3... 38 0.21
UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,... 37 0.48
UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1; Pedoba... 36 0.64
UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;... 36 1.1
UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain; ... 36 1.1
UniRef50_Q8I385 Cluster: Putative uncharacterized protein PFI031... 35 1.5
UniRef50_A5IYM2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia... 34 3.4
UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1; Para... 34 3.4
UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate red... 33 4.5
UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage 0... 33 4.5
UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 - ... 33 7.8
UniRef50_Q6FF67 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_Q675T4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7053,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 369
Score = 237 bits (579), Expect = 2e-61
Identities = 108/133 (81%), Positives = 117/133 (87%)
Frame = +3
Query: 252 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIK 431
+EPLL+ENPRRFVIFPIQY D+WQMYKKAEASFWT EEVDLS DL WE+LKD ER FI
Sbjct: 1 EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFIS 60
Query: 432 HVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPX 611
HVLAFFAASDGIVNENLV RF+QEVQVTEARCFYGF IAMEN+HSEMYSLLI TYI P
Sbjct: 61 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPS 120
Query: 612 XRDFLFNAVXTLP 650
R++LFNA+ TLP
Sbjct: 121 EREYLFNAIETLP 133
>UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase
subunit M2; n=260; root|Rep: Ribonucleoside-diphosphate
reductase subunit M2 - Homo sapiens (Human)
Length = 389
Score = 236 bits (577), Expect = 4e-61
Identities = 118/194 (60%), Positives = 140/194 (72%), Gaps = 7/194 (3%)
Frame = +3
Query: 90 MAPTVDKENLH----SGINGENRVQTKSPMKNS-VLATKNDNLTEEMDLDKNFEEFDP-- 248
+AP D + L G++ ++ T + + VLA+K + + + P
Sbjct: 8 LAPITDPQQLQLSPLKGLSLVDKENTPPALSGTRVLASKTARRIFQEPTEPKTKAAAPGV 67
Query: 249 QKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFI 428
+ EPLLRENPRRFVIFPI+Y DIWQMYKKAEASFWT EEVDLS D+ WE+LK ER+FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 429 KHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXP 608
HVLAFFAASDGIVNENLV RFSQEVQ+TEARCFYGF IAMEN+HSEMYSLLI TYI P
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 609 XXRDFLFNAVXTLP 650
R+FLFNA+ T+P
Sbjct: 188 KEREFLFNAIETMP 201
>UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=12; Eukaryota|Rep: Ribonucleoside-diphosphate
reductase small chain - Schizosaccharomyces pombe
(Fission yeast)
Length = 391
Score = 180 bits (437), Expect = 4e-44
Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
Frame = +3
Query: 219 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE 398
L K +E D E +LR NP RFV+FPI+Y +IWQ YKKAEASFWT EE+DLS DL W+
Sbjct: 57 LGKKEDELD---EVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWD 113
Query: 399 T-LKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMY 575
L ER+FI VLA+FAASDGIVNENL+ RFS EVQ+ EARC YGF I +EN+HSE Y
Sbjct: 114 NKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETY 173
Query: 576 SLLIXTYIXXPXXRDFLFNAVXTL 647
SLL+ TYI P + F+A+ T+
Sbjct: 174 SLLLDTYIREPKEKQRHFDAILTM 197
>UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,
putative; n=1; Filobasidiella neoformans|Rep:
Ribonucleotide reductase small subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 430
Score = 164 bits (398), Expect = 2e-39
Identities = 78/157 (49%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Frame = +3
Query: 183 ATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVE 362
+ K N +E + + F E ++E +LRE+ RFV+FPI+Y +IWQ YK A+ASFWT E
Sbjct: 78 SNKGGNPAKEGKVTRKFPE--EEEEDILRESESRFVLFPIKYNEIWQAYKHAQASFWTAE 135
Query: 363 EVDLSXDLSXW-ETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGF 539
E+D DL W + + + ER FI +LAFFAASDGIV EN+V +F+ EVQ+ EAR FY F
Sbjct: 136 ELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVGENIVSQFALEVQIAEARAFYSF 195
Query: 540 XIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
+E VHSE YSLLI TY+ +DFLF + +P
Sbjct: 196 QSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMTNIP 232
>UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Rep:
At5g40942 - Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 163 bits (396), Expect = 3e-39
Identities = 75/108 (69%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Frame = +3
Query: 252 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE-TLKDSERHFI 428
+EP+L P RF +FPIQYP IW+MYKKAEASFWT EEVDLS D WE +L + ERHFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 429 KHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEM 572
KHVLAFFAASDGIV ENL RF +VQ++EAR FYGF IA+EN+HSE+
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEI 113
>UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 244
Score = 154 bits (373), Expect = 2e-36
Identities = 71/98 (72%), Positives = 80/98 (81%)
Frame = +3
Query: 357 VEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYG 536
++EVDLS DL+ WE LK E+HFI HVLAFF ASDG +NENLV RFSQE+QVTEARCFYG
Sbjct: 140 IKEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYG 199
Query: 537 FXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
F IAMENVHSEMYSLLI TYI R++LFNA+ LP
Sbjct: 200 FQIAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLP 237
>UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Ribonucleoside-diphosphate reductase small chain -
Mimivirus
Length = 417
Score = 143 bits (347), Expect = 3e-33
Identities = 71/191 (37%), Positives = 106/191 (55%), Gaps = 11/191 (5%)
Frame = +3
Query: 111 ENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDK----------NFEEFDPQKEP 260
EN+ I+ + +K + + + N E +D + +FE KEP
Sbjct: 41 ENISESISEPTTINSKKKTSELIFSEETLNNVEIIDTEPYLSDYHKHAIDFENDVIMKEP 100
Query: 261 LLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWET-LKDSERHFIKHV 437
+L ++ + PI+Y +W YK ++WTVEEVDL+ D++ W L D +R+FI HV
Sbjct: 101 ILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHV 160
Query: 438 LAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXR 617
LAFFAA+DGIVN N+ V++ EA C YGF AMEN H EMYSL++ T++ R
Sbjct: 161 LAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDDALR 220
Query: 618 DFLFNAVXTLP 650
+ L N++ T+P
Sbjct: 221 NKLINSIKTMP 231
>UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot
syndrome virus|Rep: RR2 protein - White spot syndrome
virus (WSSV)
Length = 328
Score = 137 bits (332), Expect = 2e-31
Identities = 64/138 (46%), Positives = 81/138 (58%)
Frame = +3
Query: 237 EFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSE 416
+ D K L RENP RFV PI + D+W+MYKK A FWT+EE+D D WE L E
Sbjct: 27 QVDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDE 86
Query: 417 RHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTY 596
+ FI +LAFFA+SDGIV ENL R Q Q+ EAR F+ F + ME++H +Y LI
Sbjct: 87 KDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRL 146
Query: 597 IXXPXXRDFLFNAVXTLP 650
+ + LFNA P
Sbjct: 147 VPDEKDKAILFNAAQHFP 164
>UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase small
chain 2; n=3; Saccharomycetales|Rep:
Ribonucleoside-diphosphate reductase small chain 2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 345
Score = 130 bits (314), Expect = 3e-29
Identities = 59/132 (44%), Positives = 87/132 (65%)
Frame = +3
Query: 255 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKH 434
E LL EN RRFV+FPI+Y +IW YKK EASFWT EE++L+ D ++ L D ++ +I +
Sbjct: 25 EILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGN 84
Query: 435 VLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXX 614
+LA +SD +VN+ L+ FS ++Q E + FYGF I MEN++SE+YS+++ + P
Sbjct: 85 LLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKN 144
Query: 615 RDFLFNAVXTLP 650
LF + LP
Sbjct: 145 IP-LFKEIANLP 155
>UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=2; African swine fever virus|Rep:
Ribonucleoside-diphosphate reductase small chain -
African swine fever virus (strain BA71V) (ASFV)
Length = 334
Score = 124 bits (298), Expect = 2e-27
Identities = 58/137 (42%), Positives = 79/137 (57%)
Frame = +3
Query: 240 FDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSER 419
F E LL EN +RF IFPIQ+P+ W YKK E+ WT +EVD+ D+ WE + +R
Sbjct: 4 FISNMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQR 63
Query: 420 HFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYI 599
F K +LAFF +D IV ENL+ F +E++V E FY A E VHSE YS+ + T I
Sbjct: 64 EFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLI 123
Query: 600 XXPXXRDFLFNAVXTLP 650
+ +F+ + P
Sbjct: 124 PDEKEQQRIFSGIEKHP 140
>UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 351
Score = 122 bits (293), Expect = 1e-26
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 3/134 (2%)
Frame = +3
Query: 255 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXW---ETLKDSERHF 425
E +L EN RRFV+FPI+Y +I+ YKK EA FWT EE+D S D+ W + KD + +F
Sbjct: 26 ESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEYF 85
Query: 426 IKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXX 605
I+ +LA FA++D + ENL S E Q EA+CFYGF I ++N+H E+Y +LI + +
Sbjct: 86 IR-LLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKD 143
Query: 606 PXXRDFLFNAVXTL 647
R +F + L
Sbjct: 144 DEKRTSMFEEIKDL 157
>UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 257
Score = 118 bits (285), Expect = 9e-26
Identities = 59/114 (51%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Frame = +3
Query: 312 DIWQMYKKAEASFWTVEEVDLSXDLSXWET-LKDSERHFIKHVLAFFAASDGIVNENLVX 488
DIW+MYKK A+ W VEE++ S D WE L + ER F +VLAFF AS GI+N+NL
Sbjct: 86 DIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-N 144
Query: 489 RFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
RF +VQ+ EA+CFY + I ++ +HSE YSLLI T I +D LFNA+ T+P
Sbjct: 145 RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIP 198
>UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 361
Score = 109 bits (262), Expect = 6e-23
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +3
Query: 195 DNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDL 374
D+ E+ + + E KEP+L EN RFV+ PI++ ++ YKK EA FW EE+D
Sbjct: 20 DSFLEKYKIHRLEVEESQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDF 79
Query: 375 SXDLSXW-ETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAM 551
S D+ W + D ++ IK LAF +S + + L S EVQ+ EA+CFYGF I +
Sbjct: 80 SHDIINWGKKASDHDKSIIKKSLAFLCSS-VLGSFYLPEHISSEVQIPEAKCFYGFEIMV 138
Query: 552 ENVHSEMYSLLI 587
EN+H E+YSL I
Sbjct: 139 ENIHGEVYSLAI 150
>UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-128
- Ectocarpus siliculosus virus 1
Length = 419
Score = 108 bits (260), Expect = 1e-22
Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +3
Query: 282 RFVIF----PIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFF 449
RF++F +Y D++Q+YKK A FW VEE+DLS D WE E+HF+K VLAFF
Sbjct: 105 RFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFF 164
Query: 450 AASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLF 629
A+ D IV EN+ F E+ + + R + A E VH E YSLLI TY + +
Sbjct: 165 ASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVM 224
Query: 630 NAVXTLP 650
++ T+P
Sbjct: 225 RSIQTMP 231
>UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;
n=1; Ecotropis obliqua NPV|Rep: Ribonucleotide reductase
small subunit - Ecotropis obliqua NPV
Length = 341
Score = 108 bits (260), Expect = 1e-22
Identities = 59/119 (49%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Frame = +3
Query: 282 RFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE-TLKDSERHFIKHVLAFFAAS 458
R VI PI+ ++W+M K A W VEE DLS D W L ER F+KH+LAFFA++
Sbjct: 8 RKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASA 67
Query: 459 DGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNA 635
D IVN NL+ V EAR FY I +ENVHSEMYSLL+ YI R+ L NA
Sbjct: 68 DTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNA 126
>UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3173,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 441
Score = 96.3 bits (229), Expect = 6e-19
Identities = 43/56 (76%), Positives = 48/56 (85%)
Frame = +3
Query: 483 VXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
V RF+QEVQVTEARCFYGF IAMEN+HSEMYSLLI TYI P R++LFNA+ TLP
Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLP 289
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +2
Query: 254 GTSAAGEPAALCHLPYSIPRYMANVQES*SFVLDRRGSRF 373
G A GEPAAL HLP+ +P +A+VQE LDRRG R+
Sbjct: 107 GAPAEGEPAALRHLPHPVPGPLADVQEGGGVFLDRRGGRW 146
>UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase small
chain; n=14; Bacteria|Rep: Ribonucleotide-diphosphate
reductase small chain - Streptomyces coelicolor
Length = 343
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/118 (37%), Positives = 63/118 (53%)
Frame = +3
Query: 297 PIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNE 476
P++YPD ++ Y+ A + W VEEVDL D++ L E+H I ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 477 NLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
NLV + + EAR + + E VH + Y L+ TY+ P R F AV +P
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIP 142
>UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;
n=1; Arabidopsis thaliana|Rep: Ribonucleotide reductase
small subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 83
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +3
Query: 252 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSE 416
+EPLL +RF +FPI+Y IW+MYKKAEASFWT EEVDLS D+ WE L DSE
Sbjct: 7 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSE 61
>UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase beta
subunit, putative; n=1; Babesia bovis|Rep:
Ribonucleoside-diphosphate reductase beta subunit,
putative - Babesia bovis
Length = 329
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +3
Query: 243 DPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERH 422
+ E LL+EN R+V+FPI Y +W MYK+ E SFW E+ + + + +L R
Sbjct: 17 EQHNETLLKENANRWVMFPIHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELRQ 76
Query: 423 FIKHVLAF---FAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLL 584
+ ++++ S+ + + Q+ EAR FYGF ++ EN+HSE++ ++
Sbjct: 77 LVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIM 133
>UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;
n=9; Plasmodium|Rep: Ribonucleotide reductase small
subunit - Plasmodium falciparum
Length = 324
Score = 79.8 bits (188), Expect = 5e-14
Identities = 41/131 (31%), Positives = 70/131 (53%)
Frame = +3
Query: 255 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKH 434
+ +L+EN R+V+FPI+Y W YK+ E+ FWT E+ + D + L++ +++ +
Sbjct: 19 DEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDK---QYLENIDKNMLVK 75
Query: 435 VLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXX 614
L + I ++ L +Q+ E R FYGF + MEN+H E+Y+ + TYI
Sbjct: 76 DLHVYEEQALITSKML-----DIIQIPEGRAFYGFQMCMENIHDEVYACIFETYIPDSKQ 130
Query: 615 RDFLFNAVXTL 647
+ + N V L
Sbjct: 131 KRVIINKVIEL 141
>UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;
n=2; Cryptosporidium|Rep: Ribonucleotide reductase small
subunit - Cryptosporidium hominis
Length = 369
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +3
Query: 234 EEFDPQK-EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKD 410
E + QK E +L +NP R+V+FPI+Y +W +YKK E SFWT E + D + + +
Sbjct: 7 ELLEQQKNESILLDNPFRWVLFPIKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMDE 66
Query: 411 SERHFIKHVLAFFAASDGIVNEN--LVXRFSQEVQVTEARCFYGFXIAMENVHSEMY 575
+I+ V A D + L +VQV EAR ++ F + MEN++ E++
Sbjct: 67 RLLDYIEMVFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENIYKELF 123
>UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n=1;
unknown|Rep: UPI00015BCE4B UniRef100 entry - unknown
Length = 319
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 300 IQYPDIWQMYKKAEASFWTVEEVDLSXDL-SXWETLKDSERHFIKHVLAFFAASDGIVNE 476
+ YP+I +Y KA+ ++W EE DL+ D +E L D ERH++ H + FF++++G V +
Sbjct: 28 VVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGWVGQ 87
Query: 477 NLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLI 587
N++ S+ ++ TE R F G+ + E H + + ++
Sbjct: 88 NIL-EISKRIRNTETRMFLGYQLMEEMKHIDTFRYIM 123
>UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2;
Theileria|Rep: Ribonucleoside reductase, putative -
Theileria annulata
Length = 332
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +3
Query: 255 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKH 434
E LL+EN R+V+FPI++ W +YK+ E +FW E+ + D+ L + + +
Sbjct: 18 EILLKENHNRWVMFPIEHDTFWILYKEVENNFWAAEDFIFTDDIKLLYQLPKPIFNTLLN 77
Query: 435 VLAFFAASDGIV---NENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTY 596
+L+F D + ++ EVQ+ EAR FYGF + EN+H+E S + +
Sbjct: 78 LLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDENIHTETISSMFQLF 134
>UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep:
ORF20 - Ostreid herpesvirus 1
Length = 579
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/145 (28%), Positives = 68/145 (46%)
Frame = +3
Query: 144 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 323
R T +P + +L T D LTE D D K+ + + + ++ P Y +
Sbjct: 27 RKATLTPEQFEILNTSYDELTEFDDHPLYGGATDHHKDIVGKYD--HALLKPAVYQQLRD 84
Query: 324 MYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQE 503
K E+S W E+D D+ WE + ++ER ++ VLAFFA D +V + + F+ E
Sbjct: 85 FATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDRIAI-FADE 143
Query: 504 VQVTEARCFYGFXIAMENVHSEMYS 578
+ E + F + E VH +Y+
Sbjct: 144 FPLPECKDFIDWQTVNEGVHQRVYN 168
>UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n=1;
Opitutaceae bacterium TAV2|Rep:
Ribonucleoside-diphosphate reductase - Opitutaceae
bacterium TAV2
Length = 362
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +3
Query: 285 FVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE---TLKDSERHFIKHVLAFFAA 455
F + P++Y + +Y+ +A+ W E++ + D+ W + D ER I+ + +F+A
Sbjct: 37 FNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERWIIRMGIGYFSA 96
Query: 456 SDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNA 635
++GIV +N+ + V E + G EN+H++ +I + P + +F
Sbjct: 97 AEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGINPHECEAMFED 156
Query: 636 VXTL 647
+ T+
Sbjct: 157 IPTI 160
>UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=22; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 339
Score = 59.7 bits (138), Expect = 6e-08
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +3
Query: 261 LLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE-TLKDSERHFIKHV 437
L+ NP V P +YP + + + W EEV L+ D+ W TL ++ERH + +
Sbjct: 18 LMTANP---VYKPFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDWHRTLTEAERHLVTQI 74
Query: 438 LAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
FF SD VN + +SQ + TE +E +H YS L+ T
Sbjct: 75 FRFFTQSDVEVNSAYMKYYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDT 126
>UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3
protein/Ribonucleoside-diphosphate reductase beta
subunit; n=11; Francisella tularensis|Rep: Biofunctional
glutaredoxin 3 protein/Ribonucleoside-diphosphate
reductase beta subunit - Francisella tularensis subsp.
tularensis (strain WY96-3418)
Length = 410
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 297 PIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDS--ERHFIKHVLAFFAASDGIV 470
P YP + K E + W +E+DLS D++ W+ K + E+ +I ++L F SD V
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAV 161
Query: 471 NENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
+N +F + E R G A E +H Y+LL T
Sbjct: 162 GQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDT 202
>UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0257500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 352
Score = 56.8 bits (131), Expect = 4e-07
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = -3
Query: 629 KQKISXXRXXDVGXYKQGIHFRMNIFHGYXEAIETSCLSDLNFL*KSXNQVFIYNAI*SR 450
+Q + DVG +Q +H R+++ G E++E + L DL+ + +V ++A+
Sbjct: 179 EQPVLLGAVADVGLEQQRVHLRVDVLDGDLESVEGARLGDLHVGHEPGGEVLEHDAVGGG 238
Query: 449 KESKDMLDEMSLT-IF*GFPV**IXGQIDFLDGPKRSFSFLVHLPYIGVLNREDDKAPRV 273
+E + + DE++L G PV + G++ L P+R LV LP + V +RE ++
Sbjct: 239 EEGEHVGDEVALVGGQRGVPVARVGGEVHLLRRPERRHRLLVELPDLRVPDREHRESLGR 298
Query: 272 LPQQRFL 252
L QQR L
Sbjct: 299 LRQQRLL 305
>UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent virus
6|Rep: 376L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 360
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 297 PIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWET-LKDSERHFIKHVLAFFAASDGIVN 473
P YP+ + + K E S W EV + D++ W+ L D++R F+ ++ FF D V
Sbjct: 12 PFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVA 71
Query: 474 ENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
++ ++ E G E VH + YS L+ T
Sbjct: 72 SAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLET 111
>UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Beggiatoa sp. PS|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Beggiatoa sp. PS
Length = 374
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Frame = +3
Query: 297 PIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWET--LKDSERHFIKHVLAFFAASDGIV 470
P++Y + + + A +FW E+ + D W T L ++E K +++ ASD +V
Sbjct: 57 PVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLLTEAEMWLFKSNISYLTASDNLV 116
Query: 471 NENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
+NL + + E R ++ I E+ H E Y ++ ++ + +FN +P
Sbjct: 117 PDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFILESFGLDEKGQGQIFNLYQEVP 176
>UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=29; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta subunit -
Bradyrhizobium japonicum
Length = 360
Score = 56.0 bits (129), Expect = 7e-07
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 303 QYPDIWQMYKKAEASFWTVEEVDLSXDLSXWET--LKDSERHFIKHVLAFFAASDGIVNE 476
+Y ++ +K+ + + W EEV L DL+ W + + DSER + + FF SD V +
Sbjct: 36 RYAWAYEFWKRQQQTHWMGEEVPLGADLNDWASGRVTDSERALLTQIFRFFTQSDIEVGD 95
Query: 477 NLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
N R+ Q + ME VH + Y+LL+ T
Sbjct: 96 NYFKRYIPIFQPLTVQMMMAAFTNMETVHIDAYALLLKT 134
>UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 65
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +3
Query: 222 DKNFEEFDPQKEP---LLRENPRRFVIFPIQYPDIWQMYKKAEASFWT 356
+K F +F KE +L + RF + PI YP++W YKKAEASFWT
Sbjct: 17 EKEFSDFQKTKESNEKILNKESNRFTLHPIIYPEVWNFYKKAEASFWT 64
>UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n=1;
Halobacterium salinarum|Rep: Ribonucleoside reductase
small chain - Halobacterium salinarium (Halobacterium
halobium)
Length = 331
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 291 IFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE--TLKDSERHFIKHVLAFFAASDG 464
I PI Y + Y++ A+ WT EEV + D+S W+ L D+ER ++ L FF+ ++
Sbjct: 15 ILPIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAES 74
Query: 465 IVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMY 575
+ N+V + V E R + E VH++ +
Sbjct: 75 LTANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTF 111
>UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=6; Clostridium|Rep:
Ribonucleoside-diphosphate reductase, beta subunit -
Clostridium novyi (strain NT)
Length = 342
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/111 (25%), Positives = 54/111 (48%)
Frame = +3
Query: 300 IQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNEN 479
I+Y ++Y+ +FW EE+ L+ D+ + L D ER+ +++F D + +EN
Sbjct: 32 IKYNWANELYRTMLNNFWIPEEISLNEDVKQFPYLTDGERNAFDKIISFLNFLDSVQSEN 91
Query: 480 LVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFN 632
L S+ + E E +H++ YS ++ T + P RD +++
Sbjct: 92 L-PNISRYITAPEVSSLLNVQTFQEEIHAQSYSYILDT-VTNPITRDKIYD 140
>UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=13; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Treponema pallidum
Length = 351
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/110 (26%), Positives = 49/110 (44%)
Frame = +3
Query: 300 IQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNEN 479
++YP + + Y++A +FW EE+++S D+ + L E+ +L+F D I N
Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTAN 100
Query: 480 LVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLF 629
L Q + E E VHS+ YS ++ T D L+
Sbjct: 101 L-PNIGQYITANEINLCLTIQAFQEAVHSQSYSYMLDTICSPEERNDILY 149
>UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=2; Deinococcus|Rep: Ribonucleoside-diphosphate
reductase, beta chain - Deinococcus radiodurans
Length = 354
Score = 52.4 bits (120), Expect = 9e-06
Identities = 33/108 (30%), Positives = 48/108 (44%)
Frame = +3
Query: 327 YKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEV 506
Y K + W EE+ L+ D W+TL D ER H A A D + E + R V
Sbjct: 44 YAKYTSQLWFPEEIPLTNDALAWKTLSDEERWTYIHASAGLNALDTLQGEVGMPRLRDLV 103
Query: 507 QVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
+ F ME++H+ YSL+ T++ R+ +F V T P
Sbjct: 104 DGHIRKATLQFQGMMEDIHARSYSLMNKTFLTASEERE-VFEWVRTQP 150
>UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
z034R - Chlorella virus ATCV-1
Length = 410
Score = 50.0 bits (114), Expect = 5e-05
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = -3
Query: 536 AIETSCLSDLNFL*KSXNQVFIYNAI*SRKESKDMLDEMSLTIF*GF-PV**IXGQIDFL 360
++E +C +FL K QV ++AI + KE++D+LDE++L I F PV I ++D L
Sbjct: 228 SVEHTCRGVRDFLGKVVVQVLHHHAIAACKEAEDVLDEVALIIVQFFTPVYHILVELDLL 287
Query: 359 DGPKRSFSFLVHLPYIGVLNRE 294
GP+ LVHL +GV + E
Sbjct: 288 HGPESGNGLLVHLENVGVPDGE 309
>UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
b640L - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 139
Score = 50.0 bits (114), Expect = 5e-05
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = -3
Query: 563 MNIFHGYXEAIETSCLSDLNFL*KSXNQVFIYNAI*SRKESKDMLDEMSLTIF*GF-PV* 387
MN F IE SCL +F K ++F ++ + + KE ++M DE+S + PV
Sbjct: 1 MNGFVECLICIELSCLWCHHFDTKVCLKIFHHDTVGACKEPQNMFDEVSFIVVQFLTPVC 60
Query: 386 *IXGQIDFLDGPKRSFSFLVHLPYIGVLNREDDKAPR-VLPQQRFLLWVELFEIFIEVHF 210
+ + +FL GPK LVH+P I +LN + + R V+ Q RFL ++ I+ +
Sbjct: 61 NVCVKRNFLGGPKGCHCLLVHVPQIMILNGKRRELTRSVVGQNRFLCCHSIYFIYNSTYK 120
Query: 209 LSQIVIFR 186
+++ I R
Sbjct: 121 YTRLSICR 128
>UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;
n=6; Proteobacteria|Rep: Ribonucleotide reductase, beta
subunit - Hahella chejuensis (strain KCTC 2396)
Length = 405
Score = 50.0 bits (114), Expect = 5e-05
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Frame = +3
Query: 90 MAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR 269
+A + + S ++ ++ V T SP D+ + + + E PQK +
Sbjct: 19 LAVAIPAVSTSSAVSPQSPVST-SPAAAPAAGGAPDSAAKPAPVAEPVPEEVPQKLDPVN 77
Query: 270 ENPRRFV--------IFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE-TLKDSERH 422
+ +R V + P +YP W+ + A + WT ++++S D+ + L E+H
Sbjct: 78 PDDKRVVNGMTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKH 137
Query: 423 FIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
++VLA+ SD + N+ +++ E + + + E++H+ Y I T
Sbjct: 138 VYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIET 194
>UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=117; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 346
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +3
Query: 291 IFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWET--LKDSERHFIKHVLAFFAASDG 464
+ PI+Y W+ Y A+ W EV ++ D+ W++ L + ER I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 465 IVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMY 575
+V N+V + + EAR + E VH+ +
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTF 127
>UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4;
Orthopoxvirus|Rep: Uncharacterized 11.6 kDa protein -
Vaccinia virus (strain Copenhagen) (VACV)
Length = 96
Score = 49.2 bits (112), Expect = 8e-05
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = -3
Query: 632 IKQKISXXRXXDVGXYKQGIHFRMNIFHGYXEAIETSCLSDLNFL*KSXNQVFIYNAI*S 453
IK+ + ++ ++ IHFRMN+F+G+ +++ETS L +L F KS Q+FI+ ++
Sbjct: 21 IKEIVFFITIFNISIDQKTIHFRMNVFNGHLKSVETSSLGNLYFCTKSFRQIFIHYSVTG 80
Query: 452 RKESKDM 432
K+ + M
Sbjct: 81 CKKRQYM 87
>UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=6; Actinobacteria (class)|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Propionibacterium acnes
Length = 328
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/118 (22%), Positives = 53/118 (44%)
Frame = +3
Query: 297 PIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNE 476
P+ Y + +Y +A A+ W E+ L DL+ + + E H + H++++F ++ +VN+
Sbjct: 15 PVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNK 74
Query: 477 NLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
L V E + + E H + ++ T+ P RD + + +P
Sbjct: 75 ALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETF---PIDRDEAYRSHIHVP 129
>UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=17; Bacteria|Rep: Ribonucleoside-diphosphate
reductase, beta subunit - Bacillus anthracis
Length = 322
Score = 46.0 bits (104), Expect = 8e-04
Identities = 31/108 (28%), Positives = 48/108 (44%)
Frame = +3
Query: 327 YKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEV 506
+K+ A FWT EE+ +S D + W L E+ K VL D + +
Sbjct: 18 WKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHL 77
Query: 507 QVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
+ +A+ F AME VH++ YS + T + D +F+ V T P
Sbjct: 78 ENLQAKSVLAFMGAMEEVHAKSYSHIFTT-LATEEEIDEIFDWVDTHP 124
>UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1
subunit beta; n=171; root|Rep:
Ribonucleoside-diphosphate reductase 1 subunit beta -
Salmonella typhimurium
Length = 376
Score = 46.0 bits (104), Expect = 8e-04
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Frame = +3
Query: 243 DPQKEPLLRENPRRFVIFPIQYPDIWQ-MYKKAEASFWTVEEVDLSXDLSXWETLKDSER 419
D KEP+ P + Q DI++ + +K + FW EEVD+S D ++ L + E+
Sbjct: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71
Query: 420 HFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYI 599
H L + D I + + + E + E +HS Y+ +I +
Sbjct: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131
Query: 600 XXP 608
P
Sbjct: 132 NDP 134
>UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase
subunit beta (EC 1.17.4.1) (Ribonucleotide reductase
small subunit) [Contains: Aae nrdB intein (Aae RIR2
intein)]; n=1; Aquifex aeolicus|Rep:
Ribonucleoside-diphosphate reductase subunit beta (EC
1.17.4.1) (Ribonucleotide reductase small subunit)
[Contains: Aae nrdB intein (Aae RIR2 intein)] - Aquifex
aeolicus
Length = 696
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = +3
Query: 243 DPQKEPLLRENPRR-FVIFPIQYPDIWQMYK-KAEASFWTVEEVDLSXDLSXWET-LKDS 413
+ K +++ NP F + I+Y + +YK +FW EE+ + D +ET L D
Sbjct: 22 EASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDY 81
Query: 414 ERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
E+ + VL+F A D +++ F + + E E+VH+ Y ++ +
Sbjct: 82 EKRAYELVLSFLIALDSF-QVDMLKEFGRMITAPEVEMAITAQEFQESVHAYSYQFILES 140
Query: 594 YIXXPXXRDFLFN 632
+ P D ++N
Sbjct: 141 -VVDPVKADEIYN 152
>UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep:
Lmo2154 protein - Listeria monocytogenes
Length = 349
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/98 (19%), Positives = 41/98 (41%)
Frame = +3
Query: 300 IQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNEN 479
I YP ++ YK+ ++W +EVD+ D + L + E++ ++ A D
Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQYPALSEQEKYAFDAIIGLLATLDS-PQTR 97
Query: 480 LVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
+ ++ + E +H+E YS ++ +
Sbjct: 98 FIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLAS 135
>UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage
phiKZ|Rep: PHIKZ305 - Pseudomonas phage phiKZ
Length = 387
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Frame = +3
Query: 255 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKH 434
E +L ++P YP +W++YK+ + W E D S L +ET S +
Sbjct: 23 EIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCLVEFETCDKSTYDMMIK 82
Query: 435 VLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMEN--VHSEMYSLLIXTYIXXP 608
LA+ +D + + ++V S +T++R + G+ +N VH+ YS ++ P
Sbjct: 83 TLAWQWEADSVASRSIVNILSP--VMTDSRVWAGYVRINDNEDVHALTYSEIVRNSFKDP 140
>UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein z038R - Chlorella virus ATCV-1
Length = 104
Score = 43.6 bits (98), Expect = 0.004
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 466 MPSEAAKKARTCLMKCLSLSFKVXXXXXXX-XXXXXXTVQNEASAFLYICHISGY*IG 296
MPS AKK R CLMK S SF TVQ A+AFLYI +SGY +G
Sbjct: 1 MPSLPAKKPRMCLMKWRSSSFSFSRQSTTSWLSWTSSTVQKVATAFLYIWKMSGYRMG 58
>UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=4; root|Rep: Ribonucleoside-diphosphate
reductase beta subunit - Oceanobacillus iheyensis
Length = 347
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +3
Query: 300 IQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNEN 479
I YP ++MYK+ ++W +EV++S D+ + TL E+ ++ + D
Sbjct: 37 IAYPHWYKMYKRLVGNYWQADEVNMSSDVKQFSTLSKEEQDAYLKIIGLLSTLDAPQTRT 96
Query: 480 --LVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYI 599
L+ ++ + V + E VH+E YS ++ + +
Sbjct: 97 ALLISLYATDPSV---QSIMAVIAQQEAVHNESYSYVLSSVV 135
>UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2;
Lymphocystivirus|Rep: Ribonucleotide reductase -
Lymphocystis disease virus - isolate China
Length = 374
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 297 PIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE--TLKDSERHFIKHVLAFFAASDGIV 470
P YP ++ E WT +E+ L+ D++ W+ L D E+ FI +L F D V
Sbjct: 73 PFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDVSV 132
Query: 471 NENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXT 593
+ F + E R E H + Y+LL T
Sbjct: 133 GQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDT 173
>UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=5; Bacillaceae|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Bacillus halodurans
Length = 345
Score = 42.7 bits (96), Expect = 0.007
Identities = 22/100 (22%), Positives = 48/100 (48%)
Frame = +3
Query: 300 IQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNEN 479
+++ + +YK A+FWT E+++S D + TL ++E+ K ++ A D V +
Sbjct: 35 VRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDS-VQTD 93
Query: 480 LVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYI 599
R ++ + + E VH++ YS ++ + +
Sbjct: 94 YSMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLV 133
>UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep:
Slr0591 protein - Synechocystis sp. (strain PCC 6803)
Length = 355
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/92 (21%), Positives = 43/92 (46%)
Frame = +3
Query: 324 MYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQE 503
+Y++ +FW + +D++ D++ + L + ER+ +L++ D + N +
Sbjct: 53 LYQQMRENFWIPQRLDITQDVTDYWNLTNEERYAFDGILSYLTFLDSVQTCN-IPHLKSS 111
Query: 504 VQVTEARCFYGFXIAMENVHSEMYSLLIXTYI 599
V E I+ E +H++ Y +I T I
Sbjct: 112 VTAPEISLCMAEQISQEGMHNQSYQYMIETII 143
>UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;
n=21; root|Rep: Ribonucleotide reductase minor subunit -
Staphylococcus aureus
Length = 323
Score = 41.5 bits (93), Expect = 0.017
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +3
Query: 312 DIWQMYKKAEAS-FWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVX 488
D+ M+ + S W E +S D++ W+TL ++E+ K LA D ++ +
Sbjct: 11 DMTNMFWRQNISQMWVETEFKVSKDIASWKTLSEAEQDTFKKALAGLTGLDTHQADDGMP 70
Query: 489 RFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYI 599
+ Y F ME +H++ YS + T +
Sbjct: 71 LVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLL 107
>UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Psychroflexus torquis ATCC 700755|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Psychroflexus torquis ATCC 700755
Length = 270
Score = 41.5 bits (93), Expect = 0.017
Identities = 26/103 (25%), Positives = 41/103 (39%)
Frame = +3
Query: 300 IQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNEN 479
++YP I ++ +K FW EEVD+S D + L + E+H L D +
Sbjct: 30 VKYPQIEKITEKQLGFFWRPEEVDVSKDKKDFHELTEHEQHIFTSNLKRQILLDSVQGRA 89
Query: 480 LVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXP 608
F V + E + E +HS Y+ +I P
Sbjct: 90 PNLAFLPHVSLPEVENWIETWSFFETIHSRSYTHIIRNIYPDP 132
>UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=6; Lactobacillales|Rep:
Ribonucleoside-diphosphate reductase, beta chain -
Lactobacillus plantarum
Length = 336
Score = 41.1 bits (92), Expect = 0.022
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = +3
Query: 327 YKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEV 506
++K FW + +S D++ W L D R + HV D + +++ + + V
Sbjct: 34 WEKLTEQFWLDTRIPVSNDMADWRELDDDHRWVVGHVFGGLTLLDTLQSQDGLQALRRNV 93
Query: 507 QVTEARCFYGFXIAMENVHSEMYSLLIXT 593
+ ME+VH++ YS + T
Sbjct: 94 LTSHETAVLNNIQFMESVHAKSYSTIFET 122
>UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=10; root|Rep: Ribonucleotide-diphosphate
reductase beta subunit - Pseudoalteromonas tunicata D2
Length = 376
Score = 41.1 bits (92), Expect = 0.022
Identities = 26/102 (25%), Positives = 42/102 (41%)
Frame = +3
Query: 303 QYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENL 482
++P ++ +K + FW EEVD+S D +E L D E+H L + D I +
Sbjct: 33 KHPIFEKLIEKQLSFFWRPEEVDVSKDRVDFENLPDHEKHIFLSNLKYQTLLDSIQGRSP 92
Query: 483 VXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXP 608
V + E + E +HS Y+ +I P
Sbjct: 93 NVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNVTKQP 134
>UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=19; Herpesviridae|Rep:
Ribonucleoside-diphosphate reductase small chain -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 305
Score = 40.7 bits (91), Expect = 0.030
Identities = 21/89 (23%), Positives = 44/89 (49%)
Frame = +3
Query: 321 QMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQ 500
++ K+ + W +V L D+ + L + + F K + F ++ +VN N+ SQ
Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLLSQ 77
Query: 501 EVQVTEARCFYGFXIAMENVHSEMYSLLI 587
+ +Y +AMEN+H ++Y+ ++
Sbjct: 78 -FDSHDISHYYAEQMAMENIHGKVYANIL 105
>UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=14; root|Rep: Ribonucleoside-diphosphate
reductase subunit beta - Bacillus subtilis
Length = 329
Score = 39.9 bits (89), Expect = 0.052
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +3
Query: 312 DIWQM-YKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVX 488
D QM Y + FW EE+ L+ DL W+ L +E+ VLA D +
Sbjct: 16 DFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMP 75
Query: 489 RFSQEVQVTEARCFYGFXIAMEN-VHSEMYSLLIXT 593
++ V + + F MEN VH++ YS + T
Sbjct: 76 IVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMT 111
>UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit, putative; n=17; Actinomycetales|Rep:
Ribonucleoside-diphosphate reductase, beta subunit,
putative - Mycobacterium tuberculosis
Length = 314
Score = 39.1 bits (87), Expect = 0.090
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 321 QMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENL 482
+++ A FW ++D + D + WE L D ER + + F A + V E++
Sbjct: 22 KLFAGGNAKFWDPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDI 75
>UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|Rep:
Protein STU1 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 1529
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 87 TMAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLL 266
+++ K N GIN + ++Q MK++ N + M+ FE FD Q +P+L
Sbjct: 731 SVSSNAKKHNDSQGINADAQIQNIETMKSTYSVDDNSSNRTNMEQTNKFESFDKQSDPIL 790
Query: 267 R---ENPRRFV 290
+ N + F+
Sbjct: 791 KFLSSNQKEFI 801
>UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3;
Myoviridae|Rep: Ribonucleotide reductase B subunit -
Cyanophage phage S-PM2
Length = 394
Score = 37.9 bits (84), Expect = 0.21
Identities = 23/102 (22%), Positives = 39/102 (38%)
Frame = +3
Query: 303 QYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENL 482
+YP ++ ++ FW EEV L D + ++ L+ ++H L + D +
Sbjct: 49 KYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQQLRPEQKHIFTSNLKYQIMLDSVQGRGP 108
Query: 483 VXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXP 608
F + E ME VHS Y+ +I P
Sbjct: 109 GMAFMPYCSLPELESAMNIWQTMEMVHSRSYTHIIKNIYPDP 150
>UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,
beta subunit; n=1; Staphylococcus epidermidis RP62A|Rep:
Ribonucleoside-diphosphate reductase 2, beta subunit -
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Length = 340
Score = 36.7 bits (81), Expect = 0.48
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = +3
Query: 327 YKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEV 506
+K+ WT EE S DLS W+TL E+ L+ D + +
Sbjct: 23 WKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGLDTTQGTEGMPLLAFHY 82
Query: 507 QVTEARCFYGFXIAMENVHSEMYSLLIXTYI 599
R + F MEN+H + YS + + +
Sbjct: 83 PEEIWRGVFAFMSMMENIHHKSYSHIFTSLL 113
>UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1;
Pedobacter sp. BAL39|Rep: Ribonucleotide-diphosphate -
Pedobacter sp. BAL39
Length = 327
Score = 36.3 bits (80), Expect = 0.64
Identities = 21/97 (21%), Positives = 38/97 (39%)
Frame = +3
Query: 348 FWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARC 527
FW E S D+ W++L + K L D + + + + + + +
Sbjct: 28 FWVDTEYIPSKDIDSWKSLSPEIQQVYKRALGGLTLLDTLQSHTGMPKLLDHIDGLQNKA 87
Query: 528 FYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAV 638
F ME +H++ YS + T P + LF+ V
Sbjct: 88 VLSFMCMMEAIHAKSYSTIFTTVNSTPEINE-LFDWV 123
>UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG9246-PA - Nasonia vitripennis
Length = 744
Score = 35.5 bits (78), Expect = 1.1
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +3
Query: 105 DKENLH-SGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPR 281
D EN+ S E Q K P++ + K+ TE N ++ DP+ L+EN +
Sbjct: 66 DFENMDLSDAEDEELEQEKQPVEAAKTLKKSKKKTEHKKALMNLQDTDPEFFKYLKENDK 125
Query: 282 RFVIFPI--QYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE 398
R + F I ++ + ++++ T++E+++ D S +E
Sbjct: 126 RLLDFNIDDDGDNMSEADEESKVHVPTIDELEIGSDESDYE 166
>UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain;
n=1; Sulfolobus acidocaldarius|Rep: Ribonucleotide
reductase, small chain - Sulfolobus acidocaldarius
Length = 330
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 321 QMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLV 485
++++ E WT E+D S D W+ LK S+R K + ++F A + V +++
Sbjct: 35 RLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSYFLAGEECVARDIL 89
>UniRef50_Q8I385 Cluster: Putative uncharacterized protein PFI0315c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0315c - Plasmodium falciparum
(isolate 3D7)
Length = 837
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 105 DKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 275
D +N+H+ IN N + + N++ N+N ++ D N F P KE L++ N
Sbjct: 552 DNDNIHNSINNNNTINMNN--NNNINNINNNNNINSINRDINKNIFTPDKERLIKIN 606
>UniRef50_A5IYM2 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma agalactiae|Rep: Putative uncharacterized
protein - Mycoplasma agalactiae
Length = 222
Score = 34.7 bits (76), Expect = 1.9
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 90 MAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR 269
+A ENL+SG ++ Q K+ KNS A K D+ +E +DK E P+K+ L
Sbjct: 21 VAAKCGNENLNSGKEDKSDSQNKTE-KNSG-ADKKDSTSENSTIDKKENESAPKKQ-LKN 77
Query: 270 ENPR 281
ENP+
Sbjct: 78 ENPK 81
>UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Putative outer protein N
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 398
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 78 RQ*TMAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQ 251
+Q T A + KE H G GEN T M ++A KN+N +DK ++ DPQ
Sbjct: 273 KQCTTALSRWKEK-HKG-GGENSTLTPLEMMRELIALKNENFISPSSIDKIVDQADPQ 328
>UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Putative Fe-S
oxidoreductase - Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC11152)
Length = 478
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 171 NSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 275
NS+L + ++N ++D+DKN E+ QK+ LREN
Sbjct: 20 NSILLSPSENEYVDIDMDKNAYEYYKQKDFFLREN 54
>UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium phage 11b|Rep: Putative uncharacterized
protein - Flavobacterium phage 11b
Length = 154
Score = 33.9 bits (74), Expect = 3.4
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +3
Query: 141 NRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIW 320
N++QTK +K A D T +++ KN E D EP+ +N F++ Y ++
Sbjct: 24 NKIQTKEVVKIDSTAKIVDKETIKIETKKNIENEDYYYEPI--DNKSEFIVDGKVYKNVH 81
Query: 321 QMYKKAE--ASFWTVEEVDLSXDLSXWETLKDSERHFIK 431
+KK + + V+ D D+S + +K +K
Sbjct: 82 IKHKKQKDYTNIAEVKTFDKKTDISVKKDIKGKSAVLLK 120
>UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate
reductase beta chain; n=2; Enterobacteria phage Felix
01|Rep: Putative ribonucleoside diphosphate reductase
beta chain - Enterobacteria phage Felix 01
Length = 377
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/101 (21%), Positives = 45/101 (44%)
Frame = +3
Query: 306 YPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENLV 485
YP I+++YK+ +A W+ +E +E++ S + +L + +D V ++L
Sbjct: 43 YPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVMLEILKWQWEADTQVAKSLA 102
Query: 486 XRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXP 608
F+ + +EN+H+ YS ++ I P
Sbjct: 103 FAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNP 143
>UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage
0305phi8-36|Rep: Nrd beta subunit - Bacillus phage
0305phi8-36
Length = 352
Score = 33.5 bits (73), Expect = 4.5
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 3/116 (2%)
Frame = +3
Query: 312 DIW-QMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIVNENL-- 482
+IW + + EA+FW E+ + D W++L E+ V A D + + +
Sbjct: 45 EIWYDISQTLEANFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLDSLQVKAILE 104
Query: 483 VXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
V RF+ + F E H+ YS + + + P + FN P
Sbjct: 105 VIRFTTNSALANISAFIA---QQEATHTTSYSYITSSLVRLPVQNQY-FNETMKHP 156
>UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 369
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 291 IFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHVLAFFAASDGIV 470
I+P Y W Y+ +A++W+ E + D+S + L + + H A A D V
Sbjct: 38 IWPPTYAPSWHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAV 97
>UniRef50_Q6FF67 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter sp. ADP1|Rep: Putative uncharacterized
protein - Acinetobacter sp. (strain ADP1)
Length = 321
Score = 32.7 bits (71), Expect = 7.8
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +3
Query: 198 NLTEEMDLDKNFEEFDPQKEPLLR 269
N++++ ++++NFEEFD + EP L+
Sbjct: 179 NISQDYEINQNFEEFDAENEPFLK 202
>UniRef50_Q675T4 Cluster: Putative uncharacterized protein; n=1;
Oikopleura dioica|Rep: Putative uncharacterized protein
- Oikopleura dioica (Tunicate)
Length = 843
Score = 32.7 bits (71), Expect = 7.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 99 TVDKENLHSGINGENRVQTKSPMKNSVLATKND----NLTEEMDLDKNFEEFDPQKEPLL 266
T+D+ ++ GI+ RV S NS+ D +++EE+ DK +F P LL
Sbjct: 460 TIDEHDV-DGISNHTRVNINSSNNNSITINVKDESGNSISEELKFDKEQSDFPPPPLQLL 518
Query: 267 RENPR 281
R R
Sbjct: 519 RPESR 523
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,416,964
Number of Sequences: 1657284
Number of extensions: 10709699
Number of successful extensions: 28178
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 27293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28137
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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