Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L08
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p pro...   249   2e-66
AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA...   249   2e-66
U09370-1|AAA56996.1|  214|Drosophila melanogaster ribonucleoside...    97   2e-20
BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p pro...    31   1.0  
AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2 pro...    31   1.0  
AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,...    28   9.6  
AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,...    28   9.6  

>AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p
           protein.
          Length = 393

 Score =  249 bits (610), Expect = 2e-66
 Identities = 114/144 (79%), Positives = 124/144 (86%)
 Frame = +3

Query: 219 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE 398
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLS DL+ W 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 399 TLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYS 578
            LKD ERHFI HVLAFFAASDGIVNENLV RFSQEVQ+TEARCFYGF IAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 579 LLIXTYIXXPXXRDFLFNAVXTLP 650
           +LI TYI  P  R++LFNA+ T+P
Sbjct: 182 VLIDTYIRDPHQREYLFNAIETMP 205


>AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA
           protein.
          Length = 393

 Score =  249 bits (610), Expect = 2e-66
 Identities = 114/144 (79%), Positives = 124/144 (86%)
 Frame = +3

Query: 219 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWE 398
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLS DL+ W 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 399 TLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYS 578
            LKD ERHFI HVLAFFAASDGIVNENLV RFSQEVQ+TEARCFYGF IAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 579 LLIXTYIXXPXXRDFLFNAVXTLP 650
           +LI TYI  P  R++LFNA+ T+P
Sbjct: 182 VLIDTYIRDPHQREYLFNAIETMP 205


>U09370-1|AAA56996.1|  214|Drosophila melanogaster
           ribonucleoside-diphosphate reductasesmall subunit
           protein.
          Length = 214

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 43/57 (75%), Positives = 49/57 (85%)
 Frame = +3

Query: 480 LVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXTLP 650
           LV RFSQEVQ+TEARCFYGF IAMENVHSEMYS+LI TYI  P  R++LFNA+ T+P
Sbjct: 1   LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMP 57


>BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +3

Query: 201 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSX 380
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 381 DLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENV 560
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 561 HSEMYSLL 584
            S++   L
Sbjct: 116 MSKLVQTL 123


>AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +3

Query: 201 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSX 380
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 381 DLSXWETLKDSERHFIKHVLAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENV 560
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 561 HSEMYSLL 584
            S++   L
Sbjct: 116 MSKLVQTL 123


>AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,
            isoform C protein.
          Length = 1201

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +3

Query: 96   PTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 275
            PT+  +N H   N    + + +      L  K+ +L ++    +  +E D ++E   RE 
Sbjct: 1028 PTLPPKNRHKNSNRGGAIDSSNANHMQTLPPKSASLRQQQQQQQQQQERDRERE-RERER 1086

Query: 276  PRR 284
            PRR
Sbjct: 1087 PRR 1089


>AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,
            isoform D protein.
          Length = 1404

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +3

Query: 96   PTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 275
            PT+  +N H   N    + + +      L  K+ +L ++    +  +E D ++E   RE 
Sbjct: 1028 PTLPPKNRHKNSNRGGAIDSSNANHMQTLPPKSASLRQQQQQQQQQQERDRERE-RERER 1086

Query: 276  PRR 284
            PRR
Sbjct: 1087 PRR 1089


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,567,421
Number of Sequences: 53049
Number of extensions: 494991
Number of successful extensions: 1246
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)