Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L08
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35637-2|CAA84688.1| 381|Caenorhabditis elegans Hypothetical pr... 185 3e-47
U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 31 0.54
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.2
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 30 1.2
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 30 1.2
Z72505-3|CAA96610.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z35637-2|CAA84688.1| 381|Caenorhabditis elegans Hypothetical
protein C03C10.3 protein.
Length = 381
Score = 185 bits (450), Expect = 3e-47
Identities = 93/187 (49%), Positives = 124/187 (66%), Gaps = 3/187 (1%)
Frame = +3
Query: 87 TMAPTVDKENLHSGI--NGENRVQTKSPMKNSVLATKNDNLT-EEMDLDKNFEEFDPQKE 257
T V+KEN + + + N+++ + ++ + + + EE + + E D E
Sbjct: 4 TEIQNVEKENAGASVPKHSSNKLKLEKELEKLEIVDQTKAASAEETNNESEVNELDAD-E 62
Query: 258 PLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSXDLSXWETLKDSERHFIKHV 437
P+L++ RFVIFP+++ DIW YKKA ASFWTVEEVDL D++ WE + E++FI +
Sbjct: 63 PMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISRI 122
Query: 438 LAFFAASDGIVNENLVXRFSQEVQVTEARCFYGFXIAMENVHSEMYSLLIXTYIXXPXXR 617
LAFFAASDGIVNENL RFS EVQV+EAR FYGF IA+EN+HSEMYS LI TYI R
Sbjct: 123 LAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETER 182
Query: 618 DFLFNAV 638
+ LFNAV
Sbjct: 183 NTLFNAV 189
>U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical
protein F19G12.2 protein.
Length = 668
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +3
Query: 543 IAMENVHSEMYSLLIXTYIXXPXXRDFLFNAVXT 644
IA+EN+HSEMY+ L+ YI R+ LFNA+ T
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITT 478
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +3
Query: 156 KSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKK 335
K+ K+ V TK + +EMDL++ F + Q + ++N ++ P Y +I KK
Sbjct: 2693 KAEQKDFVYRTKTEEEKDEMDLEEFFANHE-QDHQVQKKNRKKCSKNPSNYANILMKIKK 2751
Query: 336 AEASFWTVEEVDLSXDLSXWETLKDS 413
+ + D+S L E + S
Sbjct: 2752 PTFLIQVLPDCDVSMLLESVERKRSS 2777
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 144 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 323
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 7 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64
Query: 324 MYKKAE---ASFWT-VEEV 368
Y + E FW+ ++EV
Sbjct: 65 EYFEKENIKVIFWSAIDEV 83
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 144 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 323
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 7 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64
Query: 324 MYKKAE---ASFWT-VEEV 368
Y + E FW+ ++EV
Sbjct: 65 EYFEKENIKVIFWSAIDEV 83
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 144 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 323
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 176 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 233
Query: 324 MYKKAE---ASFWT-VEEV 368
Y + E FW+ ++EV
Sbjct: 234 EYFEKENIKVIFWSAIDEV 252
>Z72505-3|CAA96610.1| 340|Caenorhabditis elegans Hypothetical
protein C50C10.4 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 226 LSRSISSVKLSFFVANTLFFMGDF 155
+ R+I + + +F+ NTLFF+GD+
Sbjct: 65 MDRNIFAFIMFYFLFNTLFFVGDY 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,491,554
Number of Sequences: 27780
Number of extensions: 267528
Number of successful extensions: 726
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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