Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L06
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    29   0.041
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    29   0.041
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.7  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   6.2  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   6.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 28.7 bits (61), Expect = 0.041
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 411 GSIYGLLGASGCGKTTLLSCI 473
           G +  +LG+SG GKTTLL+ +
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 28.7 bits (61), Expect = 0.041
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 411 GSIYGLLGASGCGKTTLLSCI 473
           G +  +LG+SG GKTTLL+ +
Sbjct: 104 GELLAILGSSGAGKTTLLNTL 124


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 478  PTIHDSSVVLPQPEAPKRPYIDP 410
            P++H S+VV P   +  +  +DP
Sbjct: 1797 PSVHSSTVVPPPQHSTTQSLVDP 1819



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 116  FTIHYWPAK 90
            FTIHYW  K
Sbjct: 2046 FTIHYWIEK 2054


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/46 (19%), Positives = 23/46 (50%)
 Frame = -1

Query: 452 LAAARSTQKAIYRSFSNSHIQTIQNNVRVFSCSISFVRSSDTHRLL 315
           + A  +    +YR  ++S + +  ++ R+    + FVRS +   ++
Sbjct: 478 ITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIV 523


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 153 LDKMPAYDNEGATISMEDVRE 215
           LD +  Y +EGA I  E +RE
Sbjct: 270 LDLLLKYKSEGANIDDEGIRE 290


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 153 LDKMPAYDNEGATISMEDVRE 215
           LD +  Y +EGA I  E +RE
Sbjct: 270 LDLLLKYKSEGANIDDEGIRE 290


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 442 PEAPKRPYIDP 410
           PE PKR YI P
Sbjct: 48  PEMPKRMYIHP 58


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 442 PEAPKRPYIDP 410
           PE PKR YI P
Sbjct: 48  PEMPKRMYIHP 58


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 325 CVSDERTKDMEQLKTLTLFWM 387
           CVS    KD + L TL   WM
Sbjct: 485 CVSAWNPKDCDPLITLIETWM 505


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,557
Number of Sequences: 336
Number of extensions: 3066
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)