Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L06
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 43 3e-05
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 40 3e-04
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 38 0.002
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 38 0.002
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 36 0.005
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 36 0.006
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 34 0.014
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 34 0.014
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 33 0.033
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 31 0.13
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 31 0.13
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 30 0.31
SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 28 0.93
SPCC1259.12c |||Ran GTPase binding protein |Schizosaccharomyces ... 28 1.2
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 2.2
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 27 2.8
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 27 2.8
SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|ch... 27 2.8
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 26 5.0
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 25 6.6
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 25 6.6
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 6.6
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 25 6.6
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 25 8.7
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 25 8.7
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 43.2 bits (97), Expect = 3e-05
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +3
Query: 279 FKTQKSTVASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTT 458
+ T+ V S + A+ R+ Y T ++ V L GLN+TV G +G+SGCGK+T
Sbjct: 1104 WSTEGKKVESLQSAAIEFRQVEFSYPTRRHIKV-LRGLNLTVKPGQFVAFVGSSGCGKST 1162
Query: 459 LLSCIVGRRXLNSGEIWV 512
+ I ++G + V
Sbjct: 1163 TIGLIERFYDCDNGAVLV 1180
Score = 32.3 bits (70), Expect = 0.057
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 375 VILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
++LD ++ G I L+GASG GK+T++ +
Sbjct: 436 LVLDNFSLVCPSGKITALVGASGSGKSTIIGLV 468
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 39.9 bits (89), Expect = 3e-04
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 366 NPN-VILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXX 542
NPN IL+G + + G+ +GASGCGK+T+L + +SG+I +
Sbjct: 453 NPNRPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTDSGKILIDNQRLDQITL 512
Query: 543 XXXXXXXXYMPQEVALFGE 599
+PQ+ LF +
Sbjct: 513 NSLRKAIGVVPQDTPLFND 531
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVG 479
+L +N T+ +G + L G++G GKTTLL+ +VG
Sbjct: 279 VLSDINWTIREGERWALTGSNGSGKTTLLAYVVG 312
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 330 VRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVG 479
V+ A+ + A+ P + ++ +A+ + ++G +G G+TT L CI G
Sbjct: 5 VKFANTTFLDARFP--LFKNVSFELARKQNWAIIGNTGSGRTTFLRCIQG 52
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVL 515
IL G ++T+A+G YGL G +G GK+TLL + R I +L
Sbjct: 197 ILTGASLTLAQGRRYGLTGRNGIGKSTLLRALSRREIAIPTHITIL 242
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 35.9 bits (79), Expect = 0.005
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
LD + + + KGS L+GA+G GK+TLL + G+ +G I V
Sbjct: 20 LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHISV 63
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 35.5 bits (78), Expect = 0.006
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 351 YGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
+ A ++L N+ + +G YG++G +GCGK+TLL I
Sbjct: 450 FSLAYGGRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI 490
Score = 31.5 bits (68), Expect = 0.10
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +3
Query: 300 VASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVG 479
V S + + + A Y AK + LD + + ++ S +LG +G GK+TL+ ++G
Sbjct: 684 VRSNTRLILKMTNASYTYPNAKKKS--LDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIG 741
Query: 480 RRXLNSGEIW 509
G+++
Sbjct: 742 EVIPQEGKVF 751
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 34.3 bits (75), Expect = 0.014
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXXXXXXX 557
+L+G+ V G + L+G SG GKTTLL+ + R +++G +
Sbjct: 900 LLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQR--VDTGVVTGDMLVNGRGLDSTFQR 957
Query: 558 XXXYMPQEVALFGEFSIRE 614
Y+ Q+ GE ++RE
Sbjct: 958 RTGYVQQQDVHIGESTVRE 976
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 34.3 bits (75), Expect = 0.014
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXXXXXXX 557
+L +N G + L+G SG GK+T++ ++ +NSG I +
Sbjct: 599 VLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRNVTLSSLRS 658
Query: 558 XXXYMPQEVALFGE 599
+PQ+ LF +
Sbjct: 659 SIGVVPQDSTLFND 672
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 33.1 bits (72), Expect = 0.033
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 351 YGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIV 476
+ A ++L+ + + +G YGL G +G GK+TL+ IV
Sbjct: 440 FSLAYGAKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIV 481
Score = 31.1 bits (67), Expect = 0.13
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +3
Query: 300 VASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVG 479
V ++++ + V+ +Y P L+ ++ V+ S ++G +G GK+TL+ + G
Sbjct: 665 VKTKQRAIIKVQHMSFQYPGTSKPQ--LNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTG 722
Query: 480 RRXLNSGEIW 509
GEI+
Sbjct: 723 ELLPTVGEIY 732
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSG 500
L LN+ + + ++G +G GK++L+S ++G LN G
Sbjct: 631 LRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKG 670
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 351 YGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGR 482
Y + + ++++ + + G YGLLG +G GK+T L + R
Sbjct: 81 YTLSFHGRLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAAR 124
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 29.9 bits (64), Expect = 0.31
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 390 LNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIW 509
+N G + + G G GK++LL +G NSG ++
Sbjct: 600 INFVAKNGELTCIFGKVGAGKSSLLEACMGNMYKNSGSVF 639
>SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation
specificity factor complex subunit
Pta1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.3 bits (60), Expect = 0.93
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 418 IDPLATVIFRPSKITLGFLAVPYLLCARLTHT 323
+D + V P K LGF+ YL+ RLT T
Sbjct: 639 VDKIKFVCLDPDKTKLGFMTFQYLIMFRLTCT 670
>SPCC1259.12c |||Ran GTPase binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 486
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 365 FSCSISFVRSSDTHRLLPPRSNCGLLSFE-HSVSS 264
FS +SF SSD H+ + + NC LL HS S
Sbjct: 412 FSSPLSFFMSSDFHKYMAEQINCLLLELTGHSPDS 446
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 375 VILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
+++ + + G YGL+ +G GK+TLL I
Sbjct: 289 LLIKDSELNLINGRRYGLIAPNGSGKSTLLHAI 321
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
I LN + S L+G +G GKTTL+ I+ + ++G +
Sbjct: 609 IFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSV 651
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 363 KNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXX 542
+N ++L+ +++ + G++G +G GK+TL + SG+I +
Sbjct: 1235 ENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIGL 1294
Query: 543 XXXXXXXXYMPQEVALFGEFSIRE 614
+PQE F E +IRE
Sbjct: 1295 HDLRSRLAIIPQENQAF-EGTIRE 1317
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 469 HDSSVVLPQPEAPKRPYIDPLATVIFRPSKITL 371
HDSSV + P AP++P P A + + S++ L
Sbjct: 225 HDSSVTIAYPSAPEQP---PRALITVKLSQLPL 254
>SPBC725.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 609
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = -3
Query: 189 WLLHCRKLAFCLVKYGYT----RSQSTLIHNTLLAS*E--KKKHFGFRN 61
WL H +K+A CL YGY R+ + +T S + K + GFRN
Sbjct: 502 WLDHIKKVAICL--YGYVLDPCRAMDPKVVSTSYVSLQILNKPYVGFRN 548
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1647
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 581 FLWHISYXRPRDSTARASGLSTQHPDLTRI*XSSA 477
F ++IS+ +P + +SGL+ H D + I SA
Sbjct: 550 FRYYISHLKPVQTVVTSSGLARVHTDPSEIDTDSA 584
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 423 GLLGASGCGKTTLLSCIVGRR 485
GL+G GK+TLL+C+ +
Sbjct: 240 GLVGLPNAGKSTLLNCLTASK 260
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 426 LLGASGCGKTTLLSCIVGRRXLNSG 500
++G+ CGK+++L IVG+ L G
Sbjct: 31 VVGSQSCGKSSVLENIVGKDFLPRG 55
>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 862
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -2
Query: 511 TQISPEFSXRLPTIHDSSVVLPQPEAPKRPYIDPLATVIFRPSK 380
TQ S + T SS++L P P PY +RP K
Sbjct: 667 TQASSLVPSKNNTASSSSLMLDSPVTPSSPYSTSQGYSFYRPPK 710
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLS 467
ILDG N T+ GA+GCGKT +S
Sbjct: 132 ILDGFNATIFA------YGATGCGKTHTIS 155
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +3
Query: 294 STVASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
+T+++ +C R + T + IL ++ + K ++ LLG + GK+ LL +
Sbjct: 748 TTLSTNDNLVLCWRDLNFTVVTKTSKKQILTNVSGYLKKNTLTALLGENKSGKSVLLRIL 807
Query: 474 VGRRXLNSGE 503
R S E
Sbjct: 808 SQRGIAGSVE 817
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 426 LLGASGCGKTTLLSCIV 476
LLG GKTT+L C++
Sbjct: 21 LLGLDNAGKTTILKCLL 37
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,460,545
Number of Sequences: 5004
Number of extensions: 47563
Number of successful extensions: 164
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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